CK932706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36 Identity = 90/254 (35.43%), Postives = 142/254 (55.91%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I++ GQ G Q+G+ W+ CLEHGI PDG + S T G D + FF ++ +++PRA+ +DLEP V++ + + TY L++PE ++ K A NN+A G Y+ + I + +D I + AD L+GF + +++ Y KK ++V+P+ Q VS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N+LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGV--DRKDVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDL 253
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.712e-36 Identity = 84/253 (33.20%), Postives = 139/253 (54.94%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE +++ +GQ G Q+G W+ C EHGI +G + T GG D + FF + ++PRA+ VDLEP VI+ + Y L++PE + K+ A NN+A+G Y+ G+ I + ++ I + A+ L+GF+V +++ + KK ++V+P+ Q VV+PYNS+L+ L+ H D V+LDN A+ I L ++ P++ N+LVS VI++ T +LR+ G +N D+ Sbjct: 3 REIVTVQLGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEGG--DRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQG-YSAGERIYEDIMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDL 252
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG_NEUCR (Tubulin gamma chain OS=Neurospora crassa GN=tub-4 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.269e-36 Identity = 83/254 (32.68%), Postives = 141/254 (55.51%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP-SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I+I GQ G +G+ W+ CLEHGI DG + T GG D + FF ++ +++PR++ +DLEP VI+ ++TG YR +++PE GK A NN+ G+ T G+++ + ++ I + AD L+GF++ +++ + KK ++V+P + VV PYNS+L+ L ++ D V+LDN A+ I L ++ P++ N+LVS V+S+ T +LR+ G ++ D+ Sbjct: 3 REIITIQAGQCGNSIGSQFWQQLCLEHGISQDGTIEDFATEGG--DRKDVFFYQSDDTRYIPRSILIDLEPRVINTIQTGPYRNIYNPENFYVGKSGLGAGNNWGDGYQT-GEQVHEEIMEMIEREADGSDSLEGFMMLHSIAGGTGSGLGSFLLERLNDRFPKKIIQTYSVFPDTTSAGDVVVHPYNSLLAMRRLTQNADSVVVLDNGALSHIAADRLHVQEPSFQQTNQLVSTVMSASTTTLRYPGYMHNDL 253
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.269e-36 Identity = 89/254 (35.04%), Postives = 139/254 (54.72%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I+I +GQ G Q+G W+ CLEHGI DG + T GG D + FF + ++PRA+ VDLEP VI+ ++ YR L++ E + + A NN+A G++ G+++VD +D I + AD L+GF++ +++ Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.842e-35 Identity = 81/253 (32.02%), Postives = 136/253 (53.75%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE +++ GQAG Q+G+ W C EHGI +G + T D + FF + ++PRAV +DLEP V+D +++G Y+ L++PE + A NN+A+G Y G+ + + ++ I + A+ L+GF++ +++ Y KK ++V+P VV+PYNS+LS L H D ++LDN A+ IC+ L ++ ++ N+LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REILTVSAGQAGNQIGSEFWSQLCAEHGISKEGVLEDWAT--DMTDRKDVFFYQADDEHYIPRAVMIDLEPRVLDSIKSGPYKNLYNPENFFYDPQGGGAGNNWAKG-YAAGERVYEEVMEMIDREAEGSDSLEGFMLLHSIAGGTGSGLGSYLLERMNDRYPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQVASFAQTNQLVSTVMSASTQTLRYPGYMNNDL 252
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.142e-35 Identity = 80/253 (31.62%), Postives = 132/253 (52.17%), Query Frame = 3 Query: 108 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD----DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALN 854 MRE +++ IG AG +G++ W + EHG+ + GG + N FF+ T + + R + +D E + I + + QL+ PE ++G E A NNFARG++T G I+D L+ R+ ++ LQGF + +++ Y + PSP +S VVEPYN++LST +L+ ++ + LDNEA++ IC R+L ++ Y ++N +V+ +S +T LRF G LN Sbjct: 1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDY-----ASGRFGGTSPLQLERINVFFNATASKRFYARTILIDTEASTIQRLNASS--QLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLN 246
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.360e-35 Identity = 86/254 (33.86%), Postives = 138/254 (54.33%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I+I +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +PR++ +DLEP VI+ ++ YR L++ E + + A NN+A G++ G+++VD +D + + AD L+GF++ +++ Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.360e-35 Identity = 87/254 (34.25%), Postives = 137/254 (53.94%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I++ +GQ G Q+G W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP VI+ ++ G YR L++ E + A NN+A G++ GK + + +D I + AD L+GF++ +++ Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.360e-35 Identity = 89/255 (34.90%), Postives = 139/255 (54.51%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I+I +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +PR++ +DLEP VI+ ++ YR L++ E + + A NN+A G++ G++ VD +D + + AD L+GF++ +++ Y KK ++V+P+ QV TS VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHFIPRSLLIDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQFVDDIMDMVDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
BLAST of CK932706 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.000e-35 Identity = 87/254 (34.25%), Postives = 137/254 (53.94%), Query Frame = 3 Query: 111 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV 863 RE I++ +GQ G Q+G W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP VI+ ++ G YR L++ E + A NN+A G++ GK + + +D I + AD L+GF++ +++ Y KK ++V+P+ + S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+ T +LR+ G +N D+ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253 The following BLAST results are available for this feature:
BLAST of CK932706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932706 ID=CK932706; Name=CK932706; organism=Citrus sinensis; type=EST; length=869bpback to top |