CK932713

Overview
NameCK932713
Unique NameCK932713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN1_MOUSE (Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38
Identity = 89/172 (51.74%), Postives = 111/172 (64.53%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL      + EYAEFLH   K+FTDF  VR EI+ ETDR TG  K IS VPI+L +YSP+V+NLTL+DLPG+TKV V  QP  I   I +M+  ++ K
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL---VNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTK 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN1_HUMAN (Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38
Identity = 89/172 (51.74%), Postives = 111/172 (64.53%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL      + EYAEFLH   K+FTDF  VR EI+ ETDR TG  K IS VPI+L +YSP+V+NLTL+DLPG+TKV V  QP  I   I +M+  ++ K
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL---VNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTK 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN1_BOVIN (Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38
Identity = 89/172 (51.74%), Postives = 111/172 (64.53%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL      + EYAEFLH   K+FTDF  VR EI+ ETDR TG  K IS VPI+L +YSP+V+NLTL+DLPG+TKV V  QP  I   I +M+  ++ K
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL---VNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTK 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN3_MOUSE (Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.245e-38
Identity = 91/173 (52.60%), Postives = 110/173 (63.58%), Query Frame = 2
Query:  224 KMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +ME LI LVN++Q A +ALG         +    LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL        EYAEFLH   K+FTDF  VR EI+ ETDR TG  K ISS+PI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I +M+  +I +
Sbjct:    5 EMEELIPLVNRLQDAFSALGQ--------SCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL---VTSKAEYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITR 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 90/172 (52.33%), Postives = 112/172 (65.12%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            M+ LI ++N++Q A + LG         ++   LP IA            LE+ VGKDFLPRGSGIVTRRPL+LQL    +   EYAEFLH    RF DF AVRKEI+DETDR TG+ K IS  PI+L ++SPNV+NLTLIDLPGLTKV V  QP  I Q I +M+ ++I +
Sbjct:    8 MQALIPVINRVQDAFSQLGT--------SVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQLI---QDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINR 168          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN3_HUMAN (Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4)

HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38
Identity = 91/173 (52.60%), Postives = 109/173 (63.01%), Query Frame = 2
Query:  224 KMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +ME LI LVN++Q A +ALG         +    LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQL        EYAEFLH   K+FTDF  VR EI+ ETDR TG  K ISS+PI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I  M+  +I +
Sbjct:    5 EMEELIPLVNRLQDAFSALGQ--------SCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL---VTSKAEYAEFLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITR 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN2_RAT (Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQL        EYAEFLH   K+FTDF  VR+EI+ ETDR TG  K IS VPI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I++M+  +I +
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIF---SKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISR 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQL        EYAEFLH   K+FTDF  VR+EI+ ETDR TG  K IS VPI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I++M+  +I +
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIF---SKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISR 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN2_BOVIN (Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQL        EYAEFLH   ++FTDF  VR+EI+ ETDR TG  K IS VPI+L IYSP+V+NLTLIDLPG+TKV V  QP  I   I++M+  +I +
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIF---SKTEYAEFLHCKSRKFTDFEEVRQEIEAETDRVTGTNKGISPVPINLRIYSPHVLNLTLIDLPGITKVPVGDQPQDIEYQIKDMILQFISR 166          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.891e-37
Identity = 88/172 (51.16%), Postives = 109/172 (63.37%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQL        E+AEFLH   K+FTDF  VR+EI+ ETDR TG  K IS VPI+L +YSP+V+NLTLIDLPG+TKV V  QP  I   I++M+  +I +
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIF---SKTEHAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISR 166          
The following BLAST results are available for this feature:
BLAST of CK932713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
DYN1_MOUSE4.016e-3851.74Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2[more]
DYN1_HUMAN4.016e-3851.74Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2[more]
DYN1_BOVIN4.016e-3851.74Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1[more]
DYN3_MOUSE5.245e-3852.60Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1[more]
DYN1_CAEEL6.850e-3852.33Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV... [more]
DYN3_HUMAN8.946e-3852.60Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4[more]
DYN2_RAT2.603e-3751.74Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1[more]
DYN2_MOUSE2.603e-3751.74Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2[more]
DYN2_BOVIN2.603e-3751.74Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1[more]
DYN2_HUMAN9.891e-3751.16Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_E03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932713 ID=CK932713; Name=CK932713; organism=Citrus sinensis; type=EST; length=743bp
GGGGTCAACAGCCTCCCCACTTTCTTTTAAATTTCAAACTCTCTCTCTCT
CTCTCTCTCTCTCTCGTTTGTCCTACCGGCGAAGCAAAAACTAATCACAC
AGATCTCCTCTGAACGTCGCCGTTTCCAGCATCAGTTGTCAGATCCAGCT
GATCTGAATCTGACAGCTGAGATCATCTACGTTGCCGCCGCCGTCTCCCG
AGATATCTACTTAGCTGCGAGAGAAAATGGAGAACTTGATTTCTTTGGTT
AACAAAATACAAAGAGCTTGTACGGCTCTTGGCGACCACGGTGAAGCCAG
CGCATTGCCTACTCTTTGGGACTCTCTTCCTGCTATCGCCGTCGTCGGTG
GCCAGAGTTCTGGAAAGTCATCAGTGTTGGAGAGTATTGTTGGCAAGGAC
TTTTTACCGCGTGGATCTGGTATCGTTACACGGCGTCCTCTGGTGTTGCA
GCTTCATAAACTCGAAGAAGGCAGCAGAGAATATGCAGAGTTTCTTCACA
TTCCAAGGAAAAGATTTACCGATTTTGCTGCTGTGAGGAAAGAGATTCAA
GATGAGACTGATAGAGAGACTGGTCGTACCAAACAAATCTCGAGTGTACC
AATTCATCTCAGCATATATTCCCCTAATGTTGTCAACTTAACGCTGATTG
ATCTTCCTGGGCTCACAAAAGTAGCAGTTGAGGGTCAACCAGACAGTATT
GTGCAAGATATTGAGAATATGGTTCGCTCCTACATTGAGAAGC
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