CK932713

Overview
NameCK932713
Unique NameCK932713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX1_EUMJU (Interferon-induced GTP-binding protein Mx1 OS=Eumetopias jubatus GN=MX1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15
Identity = 66/189 (34.92%), Postives = 92/189 (48.68%), Query Frame = 2
Query:  191 PSPEIST*LREKMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            P   + +   EK+   I L++ ++    ALG   + +        LPAIA            LE++ G   LPRGSGIVTR PLVL+L KL       G   Y +F        +D + V  EI    +   G  + IS   I L + SP+V +LTLIDLPG+T+VAV  QP  I    + +++ YI K
Sbjct:   35 PENSLCSQYEEKVRPCIDLIDSLR----ALGVEQDLA--------LPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKLLNKDEWRGKVSYQDF----EMEISDPSEVEVEINKAQNAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGHQTKKLIKKYILK 206          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15
Identity = 66/174 (37.93%), Postives = 87/174 (50.00%), Query Frame = 2
Query:  233 NLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLE---EGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            NL S   +  R C  L D     AL    D +LP IA            LE++ G   LPRGSGI+TR PL L+L K E   +G   Y +       +  D + V +EI+   D   G    IS   I L + SP V +LTLIDLPG+T+VAV  QP  I   I+ ++R YI++
Sbjct:   85 NLYSPFEEKVRPCIDLID--SLRALGVEQDLALPTIAVIGDQSSGKSSVLEALSGVP-LPRGSGIITRCPLALRLKKKECPWQGRISYRKV----ELQLQDPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQE 251          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX2_BOVIN (Interferon-induced GTP-binding protein Mx2 OS=Bos taurus GN=MX2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.371e-14
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  323 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +LPAIA            LE++ G   LPRGSGI+TR PLVL+L K E        + +I ++   + + V  EI+   +   G    IS   I+L I SP V +LTLIDLPG+T+VAVE QP  I   I+ +++ YI++
Sbjct:  114 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIITRCPLVLKLTKRECEWTGKITYRNITQQ-LQNPSEVEWEIRRAQNIIAGNGLGISHELINLEITSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKKYIQR 251          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX1_ICTPU (Interferon-induced GTP-binding protein Mx1 OS=Ictalurus punctatus GN=mx1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 64/196 (32.65%), Postives = 96/196 (48.98%), Query Frame = 2
Query:  194 SPEIST*LREKMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGS-------------REYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            S  +S    EK+   I L++ ++    ALG   + +        LPAIA            LE++ G   LPRGSGIVTR PL L++ +  E                +Y E +  P       A V K+I++  D   G    IS   I L + S +V +LTLIDLPG+ +VAV+GQP++I + I+ +++ +I K
Sbjct:    2 SASLSEQYEEKVRPCIDLIDSLR----ALGVEKDLA--------LPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKRSREEDFWHGKIKYKKDHDEDYEEEIQNP-------ADVEKKIREAQDHMAGVGVGISDELISLEVTSADVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIKKFITK 177          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX1_HORSE (Interferon-induced GTP-binding protein Mx1 OS=Equus caballus GN=MX1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  230 ENLISLVNKIQRACTALGDHGEASALPTLWD-SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +NL S   +  R C  L D     AL    D +LPAIA            LE++ G   LPRGSGIVTR PLVL+L +L +     G   Y +         ++   V ++++   +   G    IS   + L + SP+V +LTLIDLPG+T+VAV  QP  I + I+ ++R YI++
Sbjct:   39 KNLCSQYEEKVRPCIDLID--SLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKRLVKEDEWKGKVSYRDI----EVEISNALDVEEQVRKAQNVLAGEGVGISQELVTLEVSSPHVPDLTLIDLPGITRVAVGNQPADIGRQIKTLIRKYIQR 208          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MGM1_YEAST (Dynamin-like GTPase MGM1, mitochondrial OS=Saccharomyces cerevisiae GN=MGM1 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 51/169 (30.18%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  230 ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            + +++L  ++    T L     +SA  TL    P+I             LESIVG++FLP+GS +VTRRP+ L L      +   A+F  +      DF  V++ +  E +     ++ +S  PI L+I S  V +L+L+DLPG  +V    QP  +   I ++   Y+
Sbjct:  182 DEMLNLTKQMIEIRTILNKVDSSSAHLTL----PSIVVIGSQSSGKSSVLESIVGREFLPKGSNMVTRRPIELTLVNTPNSNNVTADFPSMRLYNIKDFKEVKRMLM-ELNMAVPTSEAVSEEPIQLTIKSSRVPDLSLVDLPGYIQVEAADQPIELKTKIRDLCEKYL 345          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX2_ICTPU (Interferon-induced GTP-binding protein Mx2 OS=Ictalurus punctatus GN=mx2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13
Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 2
Query:  323 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEE-----GSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +LPAIA            LE++ G   LPRGSGIVTR PL L++ K  +     G  +Y ++     +   D A V + I+   +   G    IS   I L + S NV +LT+IDLPG+T+VAV+ QP++I    + +++ +I K
Sbjct:   31 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLELKMKKSRKADFWHGKIKYEDY----EEEIEDPADVEQMIRKAQNEIAGTGMGISDKLISLEVTSSNVPDLTVIDLPGITRVAVKDQPENIGDQSKRLIKKFITK 170          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX2_MACMU (Interferon-induced GTP-binding protein Mx2 OS=Macaca mulatta GN=MX2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 54/140 (38.57%), Postives = 70/140 (50.00%), Query Frame = 2
Query:  323 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +LPAIA            LE++ G   LPRGSGIVTR PLVL+L K    +               D   V KEI    +   G    IS   I L I SP V +LT+IDLPG+ +VAV  QP  I   I+ +++ YI++
Sbjct:  117 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPLVLKLKKQPYKAWAGRISYQNTEIELQDPGQVEKEIHKAQNVMAGNGLGISHELISLEITSPEVPDLTIIDLPGIARVAVGNQPRDIGLQIKALIKRYIQR 255          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX2_BUBBU (Interferon-induced GTP-binding protein Mx2 OS=Bubalus bubalis GN=MX2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  323 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMV 724
            +LPAIA            LE++ G   LPRGSGI+TR PLVL+L K E        + +I ++   + + V  EI+   +   G  + IS   I+L + SP+V +LTLIDLPG+T+VAVE QP  I   I+ ++
Sbjct:  114 ALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIITRCPLVLKLTKRECEWTGKITYRNITQQ-LQNPSEVEWEIRRAQNIIAGNGRGISHELINLEVTSPDVPDLTLIDLPGITRVAVENQPQDIGLQIKALI 245          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: MX_ANAPL (Interferon-induced GTP-binding protein Mx OS=Anas platyrhynchos GN=MX PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13
Identity = 53/141 (37.59%), Postives = 72/141 (51.06%), Query Frame = 2
Query:  323 SLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSREYAEFLHIPRKRFTDF---AAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            SLPAIA            LE++ G   LPRG+GIVTR PL L+L K+        +  +  R   TD    + V   I++  D   G    IS   I L I SP V +LTLIDLPG+ +VA+  QP  I + I+ +++  I
Sbjct:  130 SLPAIAVIGDQSSGKSSILEALSGVS-LPRGNGIVTRCPLELKLKKIPTSQEWKGKISY--RNISTDLQHASEVENAIRNAQDVVAGTKGNISGELISLEICSPYVPDLTLIDLPGIARVAMRNQPQDIGEQIKKLIKKII 267          
The following BLAST results are available for this feature:
BLAST of CK932713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MX1_EUMJU4.777e-1534.92Interferon-induced GTP-binding protein Mx1 OS=Eume... [more]
MX2_PIG6.239e-1537.93Interferon-induced GTP-binding protein Mx2 OS=Sus ... [more]
MX2_BOVIN2.371e-1440.00Interferon-induced GTP-binding protein Mx2 OS=Bos ... [more]
MX1_ICTPU3.096e-1432.65Interferon-induced GTP-binding protein Mx1 OS=Icta... [more]
MX1_HORSE3.096e-1435.59Interferon-induced GTP-binding protein Mx1 OS=Equu... [more]
MGM1_YEAST1.537e-1330.18Dynamin-like GTPase MGM1, mitochondrial OS=Sacchar... [more]
MX2_ICTPU4.471e-1335.86Interferon-induced GTP-binding protein Mx2 OS=Icta... [more]
MX2_MACMU7.626e-1338.57Interferon-induced GTP-binding protein Mx2 OS=Maca... [more]
MX2_BUBBU7.626e-1339.55Interferon-induced GTP-binding protein Mx2 OS=Buba... [more]
MX_ANAPL9.960e-1337.59Interferon-induced GTP-binding protein Mx OS=Anas ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_E03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932713 ID=CK932713; Name=CK932713; organism=Citrus sinensis; type=EST; length=743bp
GGGGTCAACAGCCTCCCCACTTTCTTTTAAATTTCAAACTCTCTCTCTCT
CTCTCTCTCTCTCTCGTTTGTCCTACCGGCGAAGCAAAAACTAATCACAC
AGATCTCCTCTGAACGTCGCCGTTTCCAGCATCAGTTGTCAGATCCAGCT
GATCTGAATCTGACAGCTGAGATCATCTACGTTGCCGCCGCCGTCTCCCG
AGATATCTACTTAGCTGCGAGAGAAAATGGAGAACTTGATTTCTTTGGTT
AACAAAATACAAAGAGCTTGTACGGCTCTTGGCGACCACGGTGAAGCCAG
CGCATTGCCTACTCTTTGGGACTCTCTTCCTGCTATCGCCGTCGTCGGTG
GCCAGAGTTCTGGAAAGTCATCAGTGTTGGAGAGTATTGTTGGCAAGGAC
TTTTTACCGCGTGGATCTGGTATCGTTACACGGCGTCCTCTGGTGTTGCA
GCTTCATAAACTCGAAGAAGGCAGCAGAGAATATGCAGAGTTTCTTCACA
TTCCAAGGAAAAGATTTACCGATTTTGCTGCTGTGAGGAAAGAGATTCAA
GATGAGACTGATAGAGAGACTGGTCGTACCAAACAAATCTCGAGTGTACC
AATTCATCTCAGCATATATTCCCCTAATGTTGTCAACTTAACGCTGATTG
ATCTTCCTGGGCTCACAAAAGTAGCAGTTGAGGGTCAACCAGACAGTATT
GTGCAAGATATTGAGAATATGGTTCGCTCCTACATTGAGAAGC
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