CK932768

Overview
NameCK932768
Unique NameCK932768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK932768 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 2 
Query:    2 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 217
            GGL + TTDSSL + F  +GDI E+ +I DR+TG+SRG+GFVT  D  +   A +  N   +DGR   VN A
Sbjct:   16 GGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
[Close]
BLAST of CK932768 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 2 
Query:    2 GGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 217
            GGL + TTDSSL + F  +GDI E+ +I DR+TG+SRG+GFVT  D  +   A +  N   +DGR   VN A
Sbjct:   16 GGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
The following BLAST results are available for this feature:
BLAST of CK932768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RB24B_XENLA8.065e-1148.61RNA-binding protein 24-B OS=Xenopus laevis GN=rbm2... [more]
RB24A_XENLA8.065e-1148.61RNA-binding protein 24-A OS=Xenopus laevis GN=rbm2... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932768 ID=CK932768; Name=CK932768; organism=Citrus sinensis; type=EST; length=596bp
AGGCGGCCTGGCCTGGGCCACCACTGACAGCTCTCTCCATGAGGCCTTCA
GTGCTTACGGCGATATCCTTGAATCGAAAATTATTAACGATCGCGAGACT
GGAAGATCCAGAGGATTTGGATTCGTTACCTTCCGCGATGAGAAGTCGAT
GAGGGACGCAATCGAAGGCATGAACGGCCAGAATCTGGACGGCCGTAACA
TAACAGTCAACGAGGCCCAGTCCCGTGGAAGCGGTGGCGGTGGCGGTGGC
GGTTACGGAAGCCGTGGCGGTGGTGGATATGGAGGTGGTGGACGCCGTGA
AAGTGGTGGTGGCGGTGGATACGGTGGGAGCCGCGGATACGGGGGTGGCG
GCGGTGGATATGGTGGCCGCCGTGAAGGTGGTTACAGCCGTGACGGTGGA
TATGGCGGTGATGGTGGTTCCCGATACTCAAGGAGCGGTGCTTCTGATGG
CGGTAGCTGGAGGAACTAGGGTTTTGTAGGATAAATTAGGAGTTGAATGT
TACCGTTCCGTGTTTTGATATTTTCCTTGGGTTATGATGTGTCGTTTTGA
TCNNNTCCTGTTATCCTGTGTTGTTTCGTTCTCCCTGTTTGGTTAA
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