CK932770

Overview
NameCK932770
Unique NameCK932770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  136 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 363
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP QQRLI+AGKQ+ D +    Y+++  S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76          

HSP 2 Score: 83.5741 bits (205), Expect = 8.039e-16
Identity = 38/74 (51.35%), Postives = 54/74 (72.97%), Query Frame = 1
Query:  364 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 585
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP QQRLI+AGKQ+ D +    Y+++  S LHLVL LR
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALR 74          
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.039e-16
Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1
Query:  136 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 363
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T+ D ++ +   LHLVL LRGG
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76          

HSP 2 Score: 78.9518 bits (193), Expect = 1.980e-14
Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = 1
Query:  364 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 585
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T+ D ++ +   LHLVL LR
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLR 74          
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4)

HSP 1 Score: 78.9518 bits (193), Expect = 1.980e-14
Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  148 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 585
            VK L G    + V +S T+  +K +I  K G+P  QQRL      L+DG TL+   +   ST+ LV++     + I V+   G +   EV  + T+D +K K+  +E +  DQ  L F G+ +ED   L +Y ++ + T+   LRLR
Sbjct:    7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLR 153          

HSP 2 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 1
Query:    4 KEGIPPDQQRLIFAGKQLEDGRKLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 363
            K G+P  QQRL      L+DG  L+   +   ST+ LV++     + I V+   G +   EV  + T+D +K K+  +E +  DQ  L F G+ +ED   L +Y ++ + T+   LRLRGG
Sbjct:   35 KIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155          
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.586e-14
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  142 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 570
            + V++     +T +    D++  +K  ++ K  +P   Q L+   K L+  R+L+ Y I KE T+HL L++       + +F+       K   L+V  S ++  VKA I+ K GI P+ Q +   GK+LEDG+ +ADY I+K + L L
Sbjct:   10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFL 158          

HSP 2 Score: 70.4774 bits (171), Expect = 7.043e-12
Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 1
Query:    4 KEGIPPDQQRLIFAGKQLEDGRKLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 363
            K  +P   Q L+   K L+  R L+ Y I KE T+HL L++       + +F+       K   L+V  S ++  VKA I+ K GI P+ Q +   GK+LEDG+ +ADY I+K + L L     GG
Sbjct:   40 KTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165          
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5)

HSP 1 Score: 75.485 bits (184), Expect = 2.189e-13
Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  133 GMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 585
            G  + VK L G    + + SS ++  +KA+I  K G+   QQRL    +G  L+D   LA   +   ST+ LV+ +    + I V+   G++ T EV  + T+ ++K ++   EG+  D   L F GK LED   L +Y ++  ST+ + LRLR
Sbjct:    2 GWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLR 155          
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.043e-12
Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 1
Query:  172 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 570
            +T +   SD +  +   I+ +  +    Q L+   K L+  R L+ Y I KE+T+HL L++         + +      G+   L V  S ++  VK  I++   +PP +Q +   GK+LEDG+ +ADYNI+  S L L
Sbjct:   16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFL 154          
BLAST of CK932770 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.495e-11
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1
Query:  136 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 363
            M++F++TLTG    L V   +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L DYNI +  TL LVL +RGG
Sbjct:   28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103          
The following BLAST results are available for this feature:
BLAST of CK932770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
UBL1_SCHPO3.264e-1752.63Ubiquitin-like protein 1 OS=Schizosaccharomyces po... [more]
RUB1_YEAST8.039e-1652.63NEDD8-like protein RUB1 OS=Saccharomyces cerevisia... [more]
UCRP_MOUSE1.980e-1433.33Ubiquitin cross-reactive protein OS=Mus musculus G... [more]
UBD_HUMAN2.586e-1431.54Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2[more]
UCRP_HUMAN2.189e-1333.12Interferon-induced 17 kDa protein OS=Homo sapiens ... [more]
UBD_RAT7.043e-1230.22Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1[more]
ANUB1_HUMAN3.495e-1147.37AN1-type zinc finger and ubiquitin domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_G12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932770 ID=CK932770; Name=CK932770; organism=Citrus sinensis; type=EST; length=585bp
GACAAGGAAGGGATCCCACCAGATCAGCAGAGGCTTATCTTTGCTGGAAA
ACAGCTCGAGGATGGTCGCAAACTCGCTGACTATAATATCCAGAAGGAAT
CAACCCTCCACTTGGTCCTTCGACTTAGGGGTGGTATGCAGATCTTTGTA
AAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGAAAGCTCCGACAC
CATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAAGGGATCCCACCAG
ACCAACAGAGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGTCGCACA
CTTGCTGATTATAACATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCG
TCTCCGTGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTA
TCACCCTTGAGGTGGAAAGCTCCGACACCATTGACAATGTCAAAGCCAAA
ATTCAGGATAAGGAAGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGC
CGGTAAACAACTAGAGGATGGACGCACACTTGCAGACTACAACATCCAGA
AAGAATCAACCCTTCATTTGGTCCTCCGTCTCAGG
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