CK932819

Overview
NameCK932819
Unique NameCK932819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF1_HUMAN (ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.871e-87
Identity = 158/180 (87.78%), Postives = 166/180 (92.22%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  LF  LF KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.871e-87
Identity = 158/179 (88.27%), Postives = 165/179 (92.18%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 643
            MG  F  LF  LF KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI EAR+EL RML EDELRDAVLL+FANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N
Sbjct:    1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF1_BOVIN (ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.871e-87
Identity = 158/180 (87.78%), Postives = 166/180 (92.22%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  LF  LF KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 321.242 bits (822), Expect = 3.191e-87
Identity = 156/181 (86.19%), Postives = 169/181 (93.37%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            MGL+ +KL + LF KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDR+RI EAR+EL RML+EDELRDA+LLVFANKQDLPNAMNAAEITDKLGLHSLRQR WYIQ+ CATSG+GLYEGL+WLS N+  K+
Sbjct:    1 MGLSVSKLLNGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQRSWYIQAACATSGDGLYEGLEWLSANLKRKS 181
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3)

HSP 1 Score: 320.087 bits (819), Expect = 7.109e-87
Identity = 157/181 (86.74%), Postives = 165/181 (91.16%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            MG   T L  RLF KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RMLNEDELRDAVLLVFANKQDLPNAMN AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS  + N++
Sbjct:    1 MGNLVTHLLDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSTTLKNRS 181
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF12_CAEBR (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae GN=arf-1.2 PE=3 SV=3)

HSP 1 Score: 318.931 bits (816), Expect = 1.584e-86
Identity = 156/181 (86.19%), Postives = 165/181 (91.16%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            MG  F  LF  LF KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLP AMNAAE+TDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLSN + N++
Sbjct:    1 MGNVFGSLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKNRS 181
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF12_CAEEL (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans GN=arf-1.2 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 3.528e-86
Identity = 155/181 (85.64%), Postives = 165/181 (91.16%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            MG  F  LF  LF K+EMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLP AMNAAE+TDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLSN + N++
Sbjct:    1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKNRS 181
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 156/180 (86.67%), Postives = 164/180 (91.11%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  L   L  KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 156/180 (86.67%), Postives = 164/180 (91.11%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  L   L  KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 156/180 (86.67%), Postives = 164/180 (91.11%), Query Frame = 2 
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  L   L  KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
The following BLAST results are available for this feature:
BLAST of CK932819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF1_HUMAN1.871e-8787.78ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 ... [more]
ARF1_DROME1.871e-8788.27ADP-ribosylation factor 1 OS=Drosophila melanogast... [more]
ARF1_BOVIN1.871e-8787.78ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE... [more]
ARF_CRYNE3.191e-8786.19ADP-ribosylation factor OS=Cryptococcus neoformans... [more]
ARF_DUGJA7.109e-8786.74ADP-ribosylation factor OS=Dugesia japonica PE=2 S... [more]
ARF12_CAEBR1.584e-8686.19ADP-ribosylation factor 1-like 2 OS=Caenorhabditis... [more]
ARF12_CAEEL3.528e-8685.64ADP-ribosylation factor 1-like 2 OS=Caenorhabditis... [more]
ARF3_TAKRU4.608e-8686.67ADP-ribosylation factor 3 OS=Takifugu rubripes GN=... [more]
ARF3_RAT4.608e-8686.67ADP-ribosylation factor 3 OS=Rattus norvegicus GN=... [more]
ARF3_PONAB4.608e-8686.67ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_B10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932819 ID=CK932819; Name=CK932819; organism=Citrus sinensis; type=EST; length=695bp
GGGGATATACATATTTCTGCGTTGTTGTTAAGCTAATAAGCTTCGTCCTC
CACCCCCCCCCCTCCGCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCC
GGAAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAA
GAAAGAGATGCGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCA
CTACCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACC
ATTGGGTTTAATGTGGAGACCGTTGAATATAAGAACATCAGTTTCACTGT
GTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATT
TCCAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGAC
CGTATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGA
GCTGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAA
ATGCAATGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTCCCTC
AGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAGGG
TCTTTATGAAGGTCTGGATTGGCTCTCCAACAACATCGCTAACAAGGCCT
GAAGCTGTTAAGATCTTTTTGCGGACTGGCGATTCTGGATGCAGG
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