CK932819

Overview
NameCK932819
Unique NameCK932819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 156/180 (86.67%), Postives = 164/180 (91.11%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  L   L  KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 156/180 (86.67%), Postives = 164/180 (91.11%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  L   L  KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 156/180 (86.67%), Postives = 164/180 (91.11%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MG  F  L   L  KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3)

HSP 1 Score: 317.39 bits (812), Expect = 4.608e-86
Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            MGL F KLFSR F KK+MRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVE+KNI+FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI EA DEL +MLNEDELRDAVLLVF NKQDLPNAM+ AE+TDKL LHSLR R WYIQSTCATSG+GLYEGLDWLSN + + +
Sbjct:    1 MGLAFGKLFSRFFGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEFKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSVAEVTDKLNLHSLRSRKWYIQSTCATSGDGLYEGLDWLSNTLTSSS 181          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 317.005 bits (811), Expect = 6.018e-86
Identity = 153/177 (86.44%), Postives = 164/177 (92.66%), Query Frame = 2
Query:  119 FTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            F KLF  LF KKEMRILMVGLDAAGKTT LYKLKLGE+VTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDRDR+VEAR+EL RMLNEDELRDA+LLVFANKQDLPNAMNAAEITDKLGL SLRQR WYIQ+TCAT+G+GL+EGLDWLS  +  K+
Sbjct:    8 FGKLFDGLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQRSWYIQATCATTGDGLFEGLDWLSTELKKKS 184          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3)

HSP 1 Score: 316.235 bits (809), Expect = 1.027e-85
Identity = 151/181 (83.43%), Postives = 168/181 (92.82%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 649
            MG++F+KLFS LF  KEMRILMVGLD AGKTT LYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF+NT+G+IFVVDSNDR RI EAR+ L RMLNEDE+R+AVLLVFANKQDLP AM+AAEIT+KLGLHS+RQR WYIQ+TCATSGEGLYEGL+WLS N+ N+A
Sbjct:    1 MGVSFSKLFSNLFGHKEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHSIRQRPWYIQATCATSGEGLYEGLEWLSTNLKNQA 181          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF_AJECA (ADP-ribosylation factor OS=Ajellomyces capsulata GN=ARF PE=1 SV=3)

HSP 1 Score: 311.612 bits (797), Expect = 2.529e-84
Identity = 149/175 (85.14%), Postives = 164/175 (93.71%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 631
            MG+ F+KLF R++ KKEMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDRDR+VEAR+EL RMLNEDELRDA+LLVFANKQDLPNAM+ AEIT +LGL SL +R WYIQSTCAT+G+GLYEGL+WL+N
Sbjct:    1 MGMAFSKLFDRIWGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTRRAWYIQSTCATTGDGLYEGLEWLAN 175          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 9.608e-84
Identity = 152/180 (84.44%), Postives = 159/180 (88.33%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MGLT + L +RLF KK+MRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRI EA  EL  ML EDELRDAVLLVFANKQDLPNAM AAE+TDKL L+ LR RHW+IQSTCAT G GLYEGLDWLS  +A K
Sbjct:    1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 307.375 bits (786), Expect = 4.769e-83
Identity = 147/177 (83.05%), Postives = 164/177 (92.66%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 637
            MGLT +KLF+ L  ++EMRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR+YFQNTQG+IFVVDSNDRDRI EAR+EL  MLNEDEL+DAVLLV ANKQDLPNAMNAAEIT+K+GLHS+  R W+IQ+TCAT+G+GLYEGL+WLSN +
Sbjct:    1 MGLTISKLFASLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNRPWFIQATCATTGDGLYEGLEWLSNQV 177          
BLAST of CK932819 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3)

HSP 1 Score: 306.605 bits (784), Expect = 8.134e-83
Identity = 148/180 (82.22%), Postives = 161/180 (89.44%), Query Frame = 2
Query:  107 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTTLYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 646
            MGLT + LFSRLF KK+MRILMVGLDAAGKTT LYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI E  +EL +ML EDELRDAVLL+FANKQDLPNAM  +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct:    1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180          
The following BLAST results are available for this feature:
BLAST of CK932819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF3_MOUSE4.608e-8686.67ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN4.608e-8686.67ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN4.608e-8686.67ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF1_DICDI4.608e-8685.08ADP-ribosylation factor 1 OS=Dictyostelium discoid... [more]
ARF_NEUCR6.018e-8686.44ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARF_ASHGO1.027e-8583.43ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1... [more]
ARF_AJECA2.529e-8485.14ADP-ribosylation factor OS=Ajellomyces capsulata G... [more]
ARF2_DROME9.608e-8484.44ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]
ARF_CANAL4.769e-8383.05ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF4_BOVIN8.134e-8382.22ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_B10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932819 ID=CK932819; Name=CK932819; organism=Citrus sinensis; type=EST; length=695bp
GGGGATATACATATTTCTGCGTTGTTGTTAAGCTAATAAGCTTCGTCCTC
CACCCCCCCCCCTCCGCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCC
GGAAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAA
GAAAGAGATGCGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCA
CTACCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACC
ATTGGGTTTAATGTGGAGACCGTTGAATATAAGAACATCAGTTTCACTGT
GTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATT
TCCAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGAC
CGTATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGA
GCTGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAA
ATGCAATGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTCCCTC
AGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAGGG
TCTTTATGAAGGTCTGGATTGGCTCTCCAACAACATCGCTAACAAGGCCT
GAAGCTGTTAAGATCTTTTTGCGGACTGGCGATTCTGGATGCAGG
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