CK932825

Overview
NameCK932825
Unique NameCK932825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length465
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171
            PKF K+GDA +VK +P+KPM VE FS+YPPLGRFAVRDMRQTVAVGVIK+V+K +
Sbjct:  389 PKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDKTE 443          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171
            PKF K+GDA +VKM+P+K M VE F+DYPPLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  388 PKFVKSGDACLVKMVPSKAMCVEPFADYPPLGRFAVRDMRQTVAVGVIKSVEKTD 442          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168
            PK  K+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  391 PKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168
            PK  K+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  391 PKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168
            PK  K+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  391 PKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168
            PK  K+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  391 PKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168
            PK  K+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKNVEKK
Sbjct:  391 PKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_ORYLA (Elongation factor 1-alpha OS=Oryzias latipes GN=eef1a PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.820e-18
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171
            PKF K+GDA +VK+IP KPMVVE FS+YPPLGRFAVRDMRQTVAVGVIK V+ K+
Sbjct:  391 PKFVKSGDAAIVKLIPQKPMVVEPFSNYPPLGRFAVRDMRQTVAVGVIKAVDTKE 445          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.990e-18
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171
            PK  K+GDA MVKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIK+VEKK+
Sbjct:  383 PKMIKSGDAAMVKMVASKPMCVEAFTQYPPLGRFAVRDMRQTVAVGVIKSVEKKE 437          
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.990e-18
Identity = 40/55 (72.73%), Postives = 51/55 (92.73%), Query Frame = 1
Query:    7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171
            PKF K+GDA +VK++P+KPM VE++++YPPLGRFAVRDMRQTVAVGVIK+VEK +
Sbjct:  391 PKFVKSGDAAIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGVIKSVEKTE 445          
The following BLAST results are available for this feature:
BLAST of CK932825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF1A_YEAST2.925e-1874.55Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_PUCGR2.925e-1878.18Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A2_RAT2.925e-1879.63Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]
EF1A2_RABIT2.925e-1879.63Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_MOUSE2.925e-1879.63Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A2_HUMAN2.925e-1879.63Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN2.925e-1879.63Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A_ORYLA3.820e-1878.18Elongation factor 1-alpha OS=Oryzias latipes GN=ee... [more]
EF1A_PORYE4.990e-1876.36Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_PIRIN4.990e-1872.73Elongation factor 1-alpha OS=Piriformospora indica... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_A03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932825 ID=CK932825; Name=CK932825; organism=Citrus sinensis; type=EST; length=465bp
GGGGAGCCCAAGTTCTTTAAGAATGGAGATGCTGGAATGGTTAAGATGAT
TCCCACCAAGCCCATGGTTGTTGAAACCTTCTCTGACTACCCACCTCTTG
GTCGTTTTGCCGTTAGGGACATGCGTCAGACTGTTGCTGTTGGTGTGATT
AAGAATGTTGAAAAGAAGGATCCAACAGGTGCCAAGGTCACCAAGTCTGC
AGCCAAGAAGAAGTGAGGAGTTTTTTGGGATCTATCTGCTATAGTTAGCT
TTTATTTTCTCTGTTTATGCTATTTTTGTCGTGTTTTAGTTTGTTTTACG
GGACTTCATTTTAATTCTCTGAATTTGGTTTTATATCAGAGTTTTTTTTT
GGTAAGTTGATAAACCAGTTTTTGGATGTCAAACATTTTGTTTCAAGATT
AGCCGTTAGTGCTCGATTTTGAAAATTTAGTCGGTGCCCAAAAAAAAAAA
AAAAAAAAAAAAAAA
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