CK932825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.114e-12 Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 162 P+F K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ +GV+ +V+ Sbjct: 378 PQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.190e-11 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 4 EPKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168 +P F KNGD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G ++EK+ Sbjct: 370 KPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.652e-11 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 4 EPKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 162 +P+F K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 385 KPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.652e-11 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 4 EPKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 162 +P+F K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 385 KPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.652e-11 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 4 EPKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 162 +P+F K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 385 KPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11 Identity = 27/56 (48.21%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 4 EPKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171 +P++ K GD+ +V+ P KP+VVE +S++PPLGRFA+RD +T+A GV+ +V+K + Sbjct: 376 KPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKKAE 431
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171 P F K GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 373 PDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 171 P F K GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 373 PDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11 Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 4 EPKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 168 +P F K GD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G ++EK+ Sbjct: 370 KPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CK932825 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.716e-11 Identity = 27/52 (51.92%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 7 PKFFKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 162 P+F K GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G++ +V+ Sbjct: 379 PQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430 The following BLAST results are available for this feature:
BLAST of CK932825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932825 ID=CK932825; Name=CK932825; organism=Citrus sinensis; type=EST; length=465bpback to top |