CK932833

Overview
NameCK932833
Unique NameCK932833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.555e-101
Identity = 180/252 (71.43%), Postives = 207/252 (82.14%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAP 759
            AMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMSSTFL+ALCQA+DLRH+EEN+K  VK+ V  VAKK L+  ++G+LH +RFCEKDLLK  DRE VFAY DDPCS  YPLM+KLR VLVE AL NG  E  A++S+F K+A FEEEL+  LP  +E AR  VENG+  IP+RI ECRSYPLYR VREELG+ +LTGEK  SPGEE +KV  A+ +GK IDP+LECL+EWNG P
Sbjct:  458 AMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEP 709          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.261e-100
Identity = 179/252 (71.03%), Postives = 206/252 (81.75%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAP 759
            AMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGLISSRKT EA+DILKLMSSTFL+ALCQA+DLRH+EEN+K  VK+ V  VAKK L+  ++G+LH +RFCEKDLLK  DRE VFAY DDPCS  YPLM+KLR VLVE AL NG  E  A++S+F K+A FEEEL+  LP  +E AR  VENG+  IP+RI ECRSYPLYR VREELG+ +LTGEK  SPGEE +KV  A+ +GK IDP+LECL+EWNG P
Sbjct:  458 AMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEP 709          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 357.836 bits (917), Expect = 3.609e-98
Identity = 177/252 (70.24%), Postives = 210/252 (83.33%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAP 759
            AMASYCSELQ+LANP+TNHVQSAEQHNQDVNSLGL+S+RKT EAVDILKLM+ST++VALCQA+DLRHLEEN+K +VKN V+QVAKKVLT+  +G+L  +RF EK+LL A DRE VF+Y DDPCSA YPLMQKLR VLVEHAL +G+ E  A  S+F KI  FEEEL++ LP+E+E AR  V NG+  + NRI E RS+PLYR VREELG  FLTGEK+ SPGEE +KVF  + QGK+IDPML+CL+EWNG P
Sbjct:  448 AMASYCSELQYLANPITNHVQSAEQHNQDVNSLGLVSARKTLEAVDILKLMTSTYIVALCQAVDLRHLEENIKSSVKNCVTQVAKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSANYPLMQKLRAVLVEHALTSGDAEPEA--SVFSKITKFEEELRSALPREIEAARVAVANGTAPVANRIVESRSFPLYRFVREELGCVFLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLKEWNGEP 697          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 357.451 bits (916), Expect = 4.714e-98
Identity = 176/209 (84.21%), Postives = 191/209 (91.39%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELG 630
            AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQ+IDLRHLEEN+K TVKNTVSQVAKKVLT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPC  TYPLMQKLRQVLV+HALNNGE EK AN+SIFQKIA FE+ELK +LPKEVE+ R   ENG+ +IPNRIK CRSYPLYR VREELG
Sbjct:  456 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQSIDLRHLEENMKSTVKNTVSQVAKKVLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRQVLVDHALNNGETEKNANTSIFQKIATFEDELKAILPKEVESVRVAFENGTMSIPNRIKACRSYPLYRFVREELG 664          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 5.211e-97
Identity = 174/252 (69.05%), Postives = 205/252 (81.35%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAP 759
            AMA+YCSELQ+LANPVT+HVQS EQHNQDVNSLGLIS+ KT EA++ILKLMSST+LVALCQAIDLRHLEE  K+TVKNTVS+VA K LT     E +P RF E++LLK  DRE+VF+YIDDP +  YPLM KL+QVL E A  +  N+K  +  +F+KI AFE+ELK++LPKEVE+AR   ENG+P  PNRIKECRSYPLY+ VREELG   LTGEK  SP EEF+KV+TAMCQ KIIDP+LECL +WNG P
Sbjct:  456 AMAAYCSELQYLANPVTSHVQSTEQHNQDVNSLGLISALKTVEAIEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVALKTLTTEDKEETNPFRFSEEELLKVVDREYVFSYIDDPLNVRYPLMPKLKQVLYEQAHTSVINDKNVSLLVFEKIGAFEDELKSLLPKEVESARVAYENGNPATPNRIKECRSYPLYKFVREELGIRLLTGEKALSPDEEFEKVYTAMCQAKIIDPILECLEDWNGVP 707          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.386e-88
Identity = 157/250 (62.80%), Postives = 193/250 (77.20%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 753
            AMASY SEL +LANPVT+HVQSAEQHNQDVNSLGL+S+RK+AEA+DILKLM ST+L ALCQA+DLRHLEEN+  TVK  VSQVAKK L+ G +GEL P RFCEKDLL+  D EHVF+YIDDPC+A+YPL QKLR +LVEHA  N E EK  N+SIF KI  FE ELK  L  +V  AR++ + G+  +P+RI+ECRSYPLY  VR +LG+  L+G +  SPGE  + V+ A+ + K+I P+ +CL  W G
Sbjct:  464 AMASYTSELLYLANPVTSHVQSAEQHNQDVNSLGLVSARKSAEAIDILKLMLSTYLTALCQAVDLRHLEENMLATVKQIVSQVAKKTLSTGLNGELLPGRFCEKDLLQVVDNEHVFSYIDDPCNASYPLTQKLRNILVEHAFKNAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPDRIQECRSYPLYEFVRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKG 713          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 309.686 bits (792), Expect = 1.127e-83
Identity = 164/252 (65.08%), Postives = 188/252 (74.60%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAP 759
            AMASYCSELQFLANPVTNHV+SA QHNQDVNSLGLISSR TAEAV ILKLMS+T+LVALCQA DLRHLEE LK  V   VS  AK VL +       P R  + D+L   +RE+VF+Y+DDP S T PLMQKLR VL + AL   E E     ++F+KI AFE ELK +LPKEVE  R   ENG+  + NRIK+CRSYPLYR VR EL +  LTGE V SPGE+FDKVF A+ QGK+IDP+ ECL+EWNGAP
Sbjct:  449 AMASYCSELQFLANPVTNHVESASQHNQDVNSLGLISSRTTAEAVVILKLMSTTYLVALCQAFDLRHLEEILKKAVNEVVSHTAKSVLAI------EPFRKHD-DILGVVNREYVFSYVDDPSSLTNPLMQKLRHVLFDKALAEPEGE---TDTVFRKIGAFEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNELETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGAP 690          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PAL2_SOLTU (Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanum tuberosum GN=PAL-2 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.417e-56
Identity = 106/123 (86.18%), Postives = 115/123 (93.50%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPC 372
            AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+G  GELHP+RFCEK+LL+  DRE++FAY DDPC
Sbjct:  468 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGVLGELHPARFCEKELLRVVDREYLFAYADDPC 590          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PALY_RHOTO (Phenylalanine ammonia-lyase OS=Rhodosporidium toruloides GN=PAL PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.027e-16
Identity = 79/252 (31.35%), Postives = 115/252 (45.63%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADR-EHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEV-ENARQTVENGSPTIPNRIKECRSYPLYRLVREELG-----SNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECL 738
            A A+Y SEL  LANPVT HVQ AE  NQ VNSL LIS+R+T E+ D+L L+ +T L  + QAIDLR +E   K      +  +  +      +G        EK     A R E   +Y  D     +         +VE   +   +    N+    K+AA E  +   L ++V E         SP +       R+  LY  VREELG      +   G++  + G    K++ A+  G+I + +L+ L
Sbjct:  473 AAAAYTSELGHLANPVTTHVQPAEMANQAVNSLALISARRTTESNDVLSLLLATHLYCVLQAIDLRAIEFEFKKQFGPAIVSLIDQHFGSAMTGSNLRDELVEKVNKTLAKRLEQTNSY--DLVPRWHDAFSFAAGTVVEVLSSTSLSLAAVNA---WKVAAAESAIS--LTRQVRETFWSAASTSSPAL--SYLSPRTQILYAFVREELGVKARRGDVFLGKQEVTIGSNVSKIYEAIKSGRINNVLLKML 715          
BLAST of CK932833 vs. ExPASy Swiss-Prot
Match: PALY_AGABI (Phenylalanine ammonia-lyase (Fragment) OS=Agaricus bisporus GN=palA PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15
Identity = 36/69 (52.17%), Postives = 54/69 (78.26%), Query Frame = 1
Query:    4 AMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 210
            A A+Y +EL +LA+PV+ H+QSAE HNQ VNS+ L+S+R T  ++D+L ++ +T+L  LCQA+DLR L+
Sbjct:   71 ATAAYAAELGYLASPVSTHIQSAEMHNQAVNSMALVSARATINSIDVLSMLVATYLYNLCQALDLRALQ 139          
The following BLAST results are available for this feature:
BLAST of CK932833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PAL2_ORYSI4.555e-10171.43Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSJ2.261e-10071.03Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL1_ORYSJ3.609e-9870.24Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_HELAN4.714e-9884.21Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]
PAL3_PHAVU5.211e-9769.05Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PALY_PINTA3.386e-8862.80Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PAL3_ARATH1.127e-8365.08Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PAL2_SOLTU3.417e-5686.18Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanu... [more]
PALY_RHOTO2.027e-1631.35Phenylalanine ammonia-lyase OS=Rhodosporidium toru... [more]
PALY_AGABI3.822e-1552.17Phenylalanine ammonia-lyase (Fragment) OS=Agaricus... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_H01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932833 ID=CK932833; Name=CK932833; organism=Citrus sinensis; type=EST; length=759bp
GGGGCTATGGCTTCATATTGTTCCGAGCTCCAATTTCTTGCCAATCCTGT
TACTAACCACGTCCAAAGTGCTGAACAGCACAACCAAGATGTAAACTCCT
TGGGATTGATCTCTTCCAGGAAGACTGCTGAAGCAGTCGACATCCTGAAG
CTCATGTCTTCCACATTCTTGGTAGCGCTTTGCCAGGCTATTGATTTGAG
ACATTTGGAGGAGAATTTGAAGCATACAGTCAAGAATACTGTCAGCCAAG
TAGCTAAGAAAGTCTTAACCGTCGGTGCTAGTGGAGAGCTTCATCCATCA
AGATTCTGTGAGAAGGATCTGCTCAAAGCGGCTGATCGCGAACACGTCTT
TGCATACATTGATGACCCCTGCAGTGCTACCTATCCATTGATGCAAAAGC
TAAGGCAAGTACTTGTTGAGCACGCACTGAACAATGGAGAGAACGAGAAG
ACTGCCAACTCTTCAATCTTCCAGAAGATTGCAGCCTTTGAGGAGGAATT
GAAAACCGTTTTGCCCAAAGAAGTTGAGAACGCCAGGCAGACTGTTGAGA
ATGGAAGTCCAACAATTCCCAACAGGATCAAAGAATGCAGGTCTTACCCT
TTGTACAGGTTAGTGAGGGAGGAGCTCGGGTCTAATTTTCTAACAGGGGA
AAAAGTTACATCGCCCGGCGAGGAATTTGACAAAGTGTTTACAGCAATGT
GCCAGGGCAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAAT
GGCGCCCCT
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