CK932836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_SCHMA (60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.150e-30 Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 1 Query: 94 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 KRTKK GIVGKYG RYGASLRK IKK+E+SQH+KY C FCGK ++KRKA GIW CK C KV AGGAY +T +A T+R+ IRRLR+ ES Sbjct: 2 KRTKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAGIWECKACKKVVAGGAYVCSTTAATTIRAAIRRLRDAHES 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_OSTOS (60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a PE=3 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.150e-30 Identity = 61/91 (67.03%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 M KRTKK GIVGKYGTRYGASLRK +KKME++QHS+Y C FCGK A++R AVGIW C C K AGGAY T +A TVRS +RRLR+ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVGIWNCSKCKKTVAGGAYVYGTVAAATVRSTVRRLRDLKE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL43_YEAST (60S ribosomal protein L43 OS=Saccharomyces cerevisiae GN=RPL43A PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.667e-30 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 M KRTKK GI GKYG RYG+SLR+Q+KK+E+ QH++Y C FCGK VKR A GIW C C K AGGAYT++TA+A TVRS IRRLRE E+ Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_DROME (60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 3.667e-30 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 M KRTKK GIVGKYGTRYGASLRK +KKME++QHSKY C FCGK ++KR VGIW CK C + AGGA+ +T +A +VRS +RRLRE E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVRRLRETKE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL43_CANGA (60S ribosomal protein L43 OS=Candida glabrata GN=RPL43 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.789e-30 Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 M KRTKK GI GKYG RYG+SLR+Q+KK+EV QH++Y C FCGK V+R A GIW C C K AGGAYT++TA+A TVRS IRRLR+ E+ Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSCHSCKKTVAGGAYTVSTAAAATVRSTIRRLRDMVEA 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_MYXGL (60S ribosomal protein L37a (Fragment) OS=Myxine glutinosa GN=rpl37a PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.628e-28 Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 112 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 GIVGKYGTRYGASLRK +KK+E++QHSKY C FCGK +KR+AVGIW C C K AGGA+T NT+SAVTV+S IRRLRE + Sbjct: 2 GIVGKYGTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTSSAVTVKSAIRRLREMKD 84
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL43B_SCHPO (60S ribosomal protein L43-B OS=Schizosaccharomyces pombe GN=rpl43b PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.854e-28 Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 MTKRTKK G+ GKYG RYGASLR+ ++K+EV QHS+Y C FCG+ VKR A GIW C K C K AGGA+T+ TA+A + RS IRRLRE E Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL43A_SCHPO (60S ribosomal protein L43-A OS=Schizosaccharomyces pombe GN=rpl43a PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.854e-28 Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 MTKRTKK G+ GKYG RYGASLR+ ++K+EV QHS+Y C FCG+ VKR A GIW C K C KV AGGA+T+ TA+A + RS IRRLRE E Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGCKKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_PLAF7 (60S ribosomal protein L37a OS=Plasmodium falciparum (isolate 3D7) GN=RPL37A PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.225e-27 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 M++RTKK G+ GKYGTRYG+SLRKQIKK+E+ QH+KY C FCGK A KR VGIW CK C + GGA++L T +AV +S I RLR+Q E Sbjct: 1 MSRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKCKRKVCGGAWSLTTPAAVAAKSTIIRLRKQKE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37L_HUMAN (Putative 60S ribosomal protein L37a-like OS=Homo sapiens GN=RPL37L PE=5 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.064e-21 Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 88 MTKRTKKAG-IVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLRE 351 M K TKK G IV KY T +GASL K +K++E+SQH+KY C FCGK +KR+AV I C C K AG A+T NT SAV V+S IRRL+E Sbjct: 1 MAKCTKKVGGIVSKYRTHHGASLWKMVKEIEISQHTKYTCSFCGKTKMKRRAVKIRHCNSCMKTVAGSAWTYNTTSAVMVKSAIRRLKE 89 The following BLAST results are available for this feature:
BLAST of CK932836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932836 ID=CK932836; Name=CK932836; organism=Citrus sinensis; type=EST; length=613bpback to top |