CK932838

Overview
NameCK932838
Unique NameCK932838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21
Identity = 40/63 (63.49%), Postives = 52/63 (82.54%), Query Frame = 2
Query:  512 KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAS 700
            +P + + CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG   RKNK S++
Sbjct:   69 RPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSST 131          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.938e-21
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 2
Query:  527 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 694
            L CPRCNS +TKFCYYNNY+++QPRHFCK+C+RYWT GG +RNVP+G G RK K S
Sbjct:   41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKS 96          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.143e-21
Identity = 40/56 (71.43%), Postives = 50/56 (89.29%), Query Frame = 2
Query:  533 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAS 700
            CPRC S +TKFCYYNNY+++QPR+FCK+C+RYWT GGT+RNVPVG G R+NK S+S
Sbjct:   50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 2
Query:  509 KKPDKILP----CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 697
            +KP   LP    CPRC+S +TKFCYYNNY+++QPR+FCK C+RYWT GGT+RNVP+G G RKNK+++
Sbjct:   50 RKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHAS 116          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 2
Query:  515 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAS 700
            P++ L CPRC+S +TKFCYYNNY+++QPR+FCK+C+RYWT GG +RN+P+G   RK+K S+S
Sbjct:   36 PEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSS 97          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF16_ARATH (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  527 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQNVRTDVPNGVHHPA 778
            LPCPRCNS  TKFCYYNNYN+ QPR++CK+C+RYWT GGT+R+VPVG G R++ +S  H    T + +  +  + +      PA
Sbjct:   29 LPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRS-SSKRHRSFSTTATSSSSSSSVITTTTQEPA 111          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.496e-20
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2
Query:  527 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASH 703
            L CPRC+S +TKFCYYNNYN+ QPRHFCK C+RYWT GG +RNVPVG G R+N     +
Sbjct:   77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKN 135          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-20
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 2
Query:  533 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSAS 700
            CPRC S  TKFCYYNNY+++QPR+FCK C+RYWT GGT+RN+PVG G RKNK  +S
Sbjct:   75 CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSS 130          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.334e-20
Identity = 38/56 (67.86%), Postives = 50/56 (89.29%), Query Frame = 2
Query:  524 ILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKN 691
            +L CPRC+S++TKFCYYNNY+++QPRH+CKNC+RYWT GG +RNVP+G G  +NKN
Sbjct:   40 VLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIG-GSTRNKN 94          
BLAST of CK932838 vs. ExPASy Swiss-Prot
Match: DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.334e-20
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 2
Query:  512 KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 688
            +P +   CPRCNS +TKFCYYNNY++ QPR+ CK+C+RYWT GG++RNVPVG G RKNK
Sbjct:   63 RPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNK 121          
The following BLAST results are available for this feature:
BLAST of CK932838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF37_ARATH2.309e-2163.49Dof zinc finger protein DOF3.7 OS=Arabidopsis thal... [more]
DOF57_ARATH3.938e-2171.43Dof zinc finger protein DOF5.7 OS=Arabidopsis thal... [more]
DOF21_ARATH5.143e-2171.43Dof zinc finger protein DOF2.1 OS=Arabidopsis thal... [more]
PBF_MAIZE1.146e-2062.69Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=... [more]
DOF32_ARATH1.146e-2061.29Dof zinc finger protein DOF3.2 OS=Arabidopsis thal... [more]
DOF16_ARATH1.146e-2051.19Dof zinc finger protein DOF1.6 OS=Arabidopsis thal... [more]
DOF11_ARATH1.496e-2066.10Dof zinc finger protein DOF1.1 OS=Arabidopsis thal... [more]
DOF56_ARATH1.954e-2069.64Dof zinc finger protein DOF5.6 OS=Arabidopsis thal... [more]
DOF47_ARATH3.334e-2067.86Dof zinc finger protein DOF4.7 OS=Arabidopsis thal... [more]
DOF41_ARATH3.334e-2066.10Dof zinc finger protein DOF4.1 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932838 ID=CK932838; Name=CK932838; organism=Citrus sinensis; type=EST; length=809bp
GGGGCTCTCCTTACAACAGCACAAAACTTTGTTCCTCCCTCTCTCTGAGT
GCAAAGTTTTTATTTTTTGTGTTTTCAGTTTTATCTGCTTTGTACTTTGG
TTTTTATCTTTTAAAATGGCGGAGCCAAAGGATCAGGGGATCAAGCTCTT
TGGCAGAACCATACCTTTGCCTGAAGTAACTCCATCAGTCGGTGCCGCTC
CTTTTGTTGATGATAGAATCGATCAGGATCCAACTTGTTCAACAAATTCT
TCACGAGAAAGCGATAAGAGCAGAGACGGAGAAGAAAGAGACTCTGAGAA
GGAGATGTCGGTAGACAAGCCTGTTGAGACCAAACAGGAAGATGAAGCCC
CACCAGAAAATTCTGAGGAGTCCACAAATCCAGGTTCAACCTCGGGGATC
AGTGAGAACCCTAAAGCATCGCCTGTTGAAAAGGAGTGCACTACAGTGAA
GACTTCAAAGACAGAAGAAGAGCAGAGCGAACCTAGTACTTCACAAGAAA
AGACCTTGAAGAAACCTGACAAGATTCTTCCATGCCCACGTTGTAATAGT
ATGGACACTAAGTTCTGCTACTACAACAATTACAATGTAAACCAACCACG
ACACTTCTGCAAGAACTGCCAGAGATACTGGACAGCTGGTGGGACAATGC
GTAATGTACCTGTAGGTGCTGGTCGTCGAAAGAACAAGAACTCAGCTTCT
CACTACCGTCACATAACTGTCTCAGAAGCTCTCCAAAATGTCCGAACTGA
TGTTCCGAATGGGGTCCACCATCCTGCGTTGAAAACTAATGGTACTGTAC
TTACCTTTG
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