CK932893

Overview
NameCK932893
Unique NameCK932893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_AEDAE (60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.134e-69
Identity = 128/222 (57.66%), Postives = 162/222 (72.97%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+K YFKRYQV+++RRREGKTDY AR RLI QDKNKYNTPKYR +VR +N+DIT QI  A I GD ++ +AY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D  Y G  + TGE+Y VEP ++    FR  LDVGL +TTTG R+F            IPHS KRF G+S ++K  +AEVHR +I+  HVA YMRTL E++ + Y+  F +Y
Sbjct:    5 KVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKYRLIVRLSNRDITCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYTGCTDVTGEEYLVEPVDDGPGAFRCYLDVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEEDEDAYKRQFSKY 226          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3)

HSP 1 Score: 259.61 bits (662), Expect = 1.366e-68
Identity = 128/222 (57.66%), Postives = 160/222 (72.07%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+KAYFKRYQV+++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE  G +Y+VE  + +   F   LD GL +TTTGN+VF            IPHS KRF G+  +SK+ +AEVHRK+I   +VA YMR LME++ + Y+  F +Y
Sbjct:    5 KVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQY 226          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.785e-68
Identity = 129/222 (58.11%), Postives = 161/222 (72.52%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+K YFKRYQVK++RRREGKTDY AR RL  QDKNKYNTPKYR +VR +NKDIT QI  A I GD V+ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARRVL  L +D+ Y G  E TGE+++VEP ++    FR  LDVGL +TTTG RVF            IPHS KRF G+S ++K  +A+VHR +I+  HVA YMR+L E++ E ++  F  Y
Sbjct:    5 KVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRY 226          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_ANOGA (60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3)

HSP 1 Score: 258.455 bits (659), Expect = 3.044e-68
Identity = 128/222 (57.66%), Postives = 161/222 (72.52%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+K YFKRYQV+++RRREGKTDY AR RLI QDKNKYNTPK+R +VR +N+DIT QI  A I GD ++ +AY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D  Y G  + TGE+Y VEP  E    FR  LDVGL +TTTG RVF            IPHS KRF G+S ++K  +AE+HR +I+  HVA YMRTL E++ E ++  F +Y
Sbjct:    5 KVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKY 226          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_TOXCI (60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.193e-68
Identity = 129/222 (58.11%), Postives = 160/222 (72.07%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKY+TPKYR +VRF+N+DIT Q+  + I GD ++ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARR+LK L +D  YEG  EA GE+Y VEP  E    FR  LDVGL+KT+TG RVF            IPHS KRF G+  ++K+  AE HRK+I   HVA YMR L E++ + +   F +Y
Sbjct:    5 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYDTPKYRLIVRFSNRDITCQVAHSRIEGDKIVCAAYSHELPKYGVKVGLTNYAAAYCTGLLVARRLLKKLGLDRLYEGLKEANGEEYYVEPADEGPNAFRCNLDVGLMKTSTGARVFGAMKGAVDGGFNIPHSVKRFPGYDAEAKEYSAETHRKHILGLHVAEYMRKLEEEDEDAFNRQFSQY 226          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.193e-68
Identity = 125/222 (56.31%), Postives = 162/222 (72.97%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+K YFKRYQVK+KRRREGKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T Q+  + I GD ++ +AY+HELPRYG++VGLTNYAAAY TGLLLARR+L+ L +D  Y G  + TG++Y+VEP +N    FR  LDVGL +TTTG RVF            +PHS KRF G+  +SK+ +AEVHR +I+  HVA YMR+L +D+ + ++  F +Y
Sbjct:    5 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 226          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.577e-67
Identity = 132/225 (58.67%), Postives = 157/225 (69.78%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTE----NRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K  K+ AY+ R+Q KYKRRREGKTDY AR RLI Q KNKYN PKYR VVRFTN+DI  QI+S+ I GD V ASAY+HEL  YG+E GLTN+AAAY TGLLLARRVLK L +D  ++G  EA GE    E  E     RRPF+A LDVGL +T+TG RVF            IPHSE RF G+  +S++LDAE  +KYI+ GHVA YM TL +D+ E+Y+S F  Y
Sbjct:    5 KLVKNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDIILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRY 229          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_THEAN (60S ribosomal protein L5 OS=Theileria annulata GN=RPL5 PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.347e-66
Identity = 128/222 (57.66%), Postives = 161/222 (72.52%), Query Frame = 3
Query:  117 KSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ---LDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K+KAYF+R+QVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +  QI+S+++ GD V ASA + EL  YG++VGLTNYAAAYCTGLLLARR+L  L++D+++ G VEA GE Y VE  +N RRPF+ALLDVG+   TTGNRVF            +PHSEKRF G+S D +     DA+ HR  I+  HVA YM  L E++PEKY+  F  Y
Sbjct:    8 KNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEDDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGTYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKKQFSAY 229          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.290e-66
Identity = 128/222 (57.66%), Postives = 161/222 (72.52%), Query Frame = 3
Query:  117 KSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSK---QLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            K+KAYF+R+QVK++RRREGKTDY AR RL+ QDKNKY++PKYR VVR TNK +  QI+S+++ GD V ASA + EL  YG++VGLTNYAAAYCTGLLLARR+L  L++D+++ G VEA GE Y VE  +N RRPF+ALLDVG+   TTGNRVF            +PHSEKRF G+S D +     DA+ HR  I+  HVA YM  L E++PEKY+  F  Y
Sbjct:    8 KNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFSAY 229          
BLAST of CK932893 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.150e-65
Identity = 129/226 (57.08%), Postives = 160/226 (70.80%), Query Frame = 3
Query:  108 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLD----AEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEY 770
            KA K+KAYFKR+QVKY+RRREGKTDY AR RLI QDKNKYN PKYRFVVR TN  +  Q++ A++ GD ++ SA + EL RYG++VGLTNY+AAY TGLLLARR+LK   +  E++G  + +GE+Y +E  +E RRPF+ +LDVG+V TT GNRVF            IPHS KRF GF+K     D     EVHR  IY  HVA YMRTL E++PE+YQ+ F  Y
Sbjct:    5 KAIKNKAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAY 230          
The following BLAST results are available for this feature:
BLAST of CK932893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
RL5_AEDAE6.134e-6957.6660S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 ... [more]
RL5_MOUSE1.366e-6857.6660S ribosomal protein L5 OS=Mus musculus GN=Rpl5 P... [more]
RL5_DROME1.785e-6858.1160S ribosomal protein L5 OS=Drosophila melanogaste... [more]
RL5_ANOGA3.044e-6857.6660S ribosomal protein L5 OS=Anopheles gambiae GN=R... [more]
RL5_TOXCI5.193e-6858.1160S ribosomal protein L5 OS=Toxoptera citricida GN... [more]
RL5_BOMMO5.193e-6856.3160S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE... [more]
RL5_NEUCR2.577e-6758.6760S ribosomal protein L5 OS=Neurospora crassa GN=r... [more]
RL5_THEAN6.347e-6657.6660S ribosomal protein L5 OS=Theileria annulata GN=... [more]
RL5_THEPA8.290e-6657.6660S ribosomal protein L5 OS=Theileria parva GN=RPL... [more]
RL5_EIMTE3.150e-6557.0860S ribosomal protein L5 OS=Eimeria tenella GN=RPL... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004350_C10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932893 ID=CK932893; Name=CK932893; organism=Citrus sinensis; type=EST; length=771bp
GGGGGAGCGTGTTACGGTTTAAGTACATTGGATTTAGCTCGCGGCTNNNT
CACAACTTCTCGAACTCTGCTGCTTCTACACTTTGAGCTTCAGCAATGGC
CTTTGCCAAAGCTCAAAAGTCAAAAGCTTACTTTAAGCGATATCAAGTTA
AGTACAAGAGAAGGCGAGAGGGAAAGACTGACTATCGGGCTAGGATTCGC
CTGATCAACCAAGATAAAAACAAGTACAACACGCCAAAGTATCGGTTTGT
TGTGCGATTCACCAACAAAGATATCACTGCACAAATTATATCTGCCAGCA
TAGCCGGGGATATAGTCCTTGCATCTGCTTATGCCCATGAGCTTCCCCGT
TATGGTCTTGAGGTGGGCCTCACTAATTATGCAGCAGCTTATTGCACTGG
ACTCCTCTTGGCCCGCCGAGTCCTGAAAATGCTTGAGATGGATGCTGAGT
ATGAGGGGCACGTTGAGGCAACAGGAGAGGACTATTCAGTTGAGCCAACT
GAGAACAGGAGGCCTTTCCGTGCCCTGCTTGATGTTGGTCTTGTGAAAAC
AACTACTGGTAACCGTGTCTTTGGCGCTCTTAAGGGTGCATTGGATGGTG
GACTTGATATCCCTCACAGTGAGAAGAGATTTGCTGGATTCAGTAAGGAT
AGTAAGCAACTTGACGCTGAAGTTCACCGTAAATACATCTATTGTGGTCA
TGTCGCTGCCTACATGAGGACTTTGATGGAAGATGAGCCAGAGAAGTACC
AGTCTCACTTTTGTGAATACA
back to top