CK932900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_IGNH4 (30S ribosomal protein S15P/S13e OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps15p PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33 Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 2 Query: 92 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 KG S S P + TPP W+ ++++ I + +KKG PS IG+ILRD G+ VK + G K+++I++ G+AP IPEDL+HL+K+AV +R HL + KDK S L+ +ES+I RL +YYK+ KLPP WKY+ A LV Sbjct: 7 KGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPLVKPIVGKKLVKIMEEQGVAPPIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLV 148
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METLZ (30S ribosomal protein S15P/S13e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps15p PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33 Identity = 67/151 (44.37%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 520 M RMH+R +GI++S PY++ P+W +++E I + K GLT +QIG++LRD HG+ VK TG +I I++ + L +IPEDL +L+ KA+ +RKHLE+NRKD +K +L L E+++ RL +YY TK+LP W Y+ TA L++ Sbjct: 1 MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLS 151
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_SULSO (30S ribosomal protein S15P/S13e OS=Sulfolobus solfataricus GN=rps15p PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32 Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 2 Query: 86 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 520 R KG S S P + P W++++ ++VE + + AK+G TPS IG+ILRD +GI VK + G K+ +IL+ GLAP+IPEDL++LI+KAV +R+H+ +DK +K L +ES+I RL RYYK KLP W Y+ A LVA Sbjct: 5 RAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPLVKQIVGKKVTQILEERGLAPQIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKIRRLTRYYKGIGKLPQEWVYDPAKAELLVA 149
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRAB (30S ribosomal protein S15P/S13e OS=Pyrococcus abyssi GN=rps15p PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32 Identity = 74/157 (47.13%), Postives = 98/157 (62.42%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M RMH+R +G S S P + PP WL+ + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLV 157
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_SULTO (30S ribosomal protein S15P/S13e OS=Sulfolobus tokodaii GN=rps15p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.105e-31 Identity = 69/145 (47.59%), Postives = 96/145 (66.21%), Query Frame = 2 Query: 86 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 520 R G S S P + P W++ + ++VE + + AKKG +PS IG+ILRD +GI VK +TG K+ +IL+ GLAP+IPEDL++LI+KA +R+HL + KDK +K L +ES+I RLA YYK+ KLP WKYE A L + Sbjct: 5 RPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPLVKQITGKKLTKILEEKGLAPKIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKIRRLADYYKRIGKLPKEWKYEPEKAELLAS 149
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRIL (30S ribosomal protein S15P/S13e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps15p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.105e-31 Identity = 69/141 (48.94%), Postives = 94/141 (66.67%), Query Frame = 2 Query: 92 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 514 KG S S P T P+W++ + +VE + + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ EIPEDL +LIK+A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLP + Y S L Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPDEVEQLVVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIRQEIPEDLLNLIKRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKLPKEFVYNPEALSHL 149
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRFU (30S ribosomal protein S15P/S13e OS=Pyrococcus furiosus GN=rps15p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.105e-31 Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M RMH+R +G S S P + PP W++ + +++E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ TA LV Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGIPSVKLFKDPDNPNRNLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLV 157
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METMA (30S ribosomal protein S15P/S13e OS=Methanosarcina mazei GN=rps15p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.105e-31 Identity = 68/150 (45.33%), Postives = 96/150 (64.00%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M +MH++ KG S+S P + PP W KI + +V K+G++ S+IG+ILRD +G+ K VTG KI ILK + +AP +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 1 MAKMHTKRKGKSSSTRPNRTEPPEWCKIGADEVTTITLDLWKQGVSTSEIGMILRDRYGVPDAKLVTGKKITTILKENNVAPNLPEDLTNLIVKALGLRKHLSTNKKDVHNKRALNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METAC (30S ribosomal protein S15P/S13e OS=Methanosarcina acetivorans GN=rps15p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.443e-31 Identity = 65/150 (43.33%), Postives = 97/150 (64.67%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M +MH++ KG S+S P + PP W KI + +V + K+G++ ++IG++LRD +G+ K +TG K+ ILK + +AP IPEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 1 MAKMHTKRKGKSSSTRPIRTDPPEWCKIGADEVTTIVLDLWKQGVSTAEIGMVLRDRYGVPDAKLITGKKVTTILKENNVAPNIPEDLTNLIVKALGLRKHLSVNKKDVHNKRSLNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_ARCFU (30S ribosomal protein S15P/S13e OS=Archaeoglobus fulgidus GN=rps15p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.443e-31 Identity = 68/141 (48.23%), Postives = 95/141 (67.38%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 490 M R+H+R +G S S Y+ +PP W+ +S ++VE + + +G PS IG+ILRD +GI VK VTG KI +ILK HG+ + PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ YYK+ LP WKY Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKY 141 The following BLAST results are available for this feature:
BLAST of CK932900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932900 ID=CK932900; Name=CK932900; organism=Citrus sinensis; type=EST; length=809bpback to top |