CK932900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRAE (30S ribosomal protein S15P/S13e OS=Pyrobaculum aerophilum GN=rps15p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.884e-31 Identity = 67/141 (47.52%), Postives = 96/141 (68.09%), Query Frame = 2 Query: 92 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 514 KG S S P T P+W++ + ++VE + + A++G PSQIG+ILRD +GI V+ +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLPP + Y S L Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITGKKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLVKYYKRVGKLPPDFVYNPQALSHL 149
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METVS (30S ribosomal protein S15P/S13e OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps15p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.884e-31 Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M R+HS +G S S P + P W+ +S+++V+ I + AK G + IG ILRD +GI VK VTG + I+K G E+PEDL++L+KKA+ +R HLE N +D SK L L+ES+I RL +YYK TK LP W+Y TA LV Sbjct: 1 MARLHSGKRGSSGSTKPLRTEVPEWVSMSAEEVQAKIVEMAKDGNQSAIIGNILRDMYGIPNVKLVTGKSVSSIMKDAGFYSEVPEDLFNLMKKAINLRNHLENNPRDIHSKVGLNLIESKIRRLVKYYKGTKVLPATWRYSPQTARLLV 150
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRHO (30S ribosomal protein S15P/S13e OS=Pyrococcus horikoshii GN=rps15p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.461e-31 Identity = 73/157 (46.50%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M RMH+R +G S S P + PP WL + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLDYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPRDWRYDPEQAKLLV 157
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METHJ (30S ribosomal protein S15P/S13e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps15p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.461e-31 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 520 M RMH+R +GIS S PY+ P W + + I ++G + ++IG+++RD +G+ VK TG KI +IL+ + LA EIPEDL +LI+KA+ +RKHL N++D +K +L+L ES++ RL +YY +KKLP W Y+ TA L++ Sbjct: 1 MARMHARRRGISRSVRPYRTQAPEWSNTDKEAIIKQIVDLRRQGSSTAEIGLVMRDKYGVPSVKLATGKKITQILRDNDLASEIPEDLRNLIEKALGMRKHLAENKRDIHNKRQLMLTESKVRRLVKYYVSSKKLPKDWVYKPETAEILLS 151
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRAR (30S ribosomal protein S15P/S13e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps15p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.214e-31 Identity = 66/141 (46.81%), Postives = 96/141 (68.09%), Query Frame = 2 Query: 92 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 514 KG S S P T P+W++ + ++VE + A++G PSQIG++LRD +GI VKS+TG K++++L+ HG+ EIPEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ +LP + Y S L Sbjct: 12 KGRSGSVRPAHPTVPTWIQYTPEEVEQLAVELARRGFQPSQIGIVLRDQYGIPLVKSITGKKLVKVLEEHGIKYEIPEDLLNLIRRALRIRKHLEEHPKDMSSRRGLQLVESKIHRLIKYYKRVGRLPRDFVYNPQALSHL 152
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METM7 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps15p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.214e-31 Identity = 67/150 (44.67%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M R+HS +G S S P + P W+ +S++D+E I + AK G + IG ILRD +G+ VK VTG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPEWVSMSAEDIEAKIVEMAKDGKQSAIIGNILRDMYGVPSVKLVTGKSVSSIMKEAGFYTEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPDTARLLV 150
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_METMP (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis GN=rps15p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31 Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 517 M R+HS +G S S P + P W+ +S++D+E I + AK G + IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPEWVSMSAEDIEAKIVEMAKDGKQSAIIGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPETARLLV 150
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_NITMS (30S ribosomal protein S15P/S13e OS=Nitrosopumilus maritimus (strain SCM1) GN=rps15p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.482e-31 Identity = 64/146 (43.84%), Postives = 96/146 (65.75%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTA 505 MGRMH+ G S S P PSW+ S ++E+ + K++K GLTPSQIG+ LRD H I +K +T I IL+ + L E+PEDL +++KKAV +++HL+ N+ D+ + L L+E+++HRL+ YYKK ++P WKY+S A Sbjct: 1 MGRMHTHRHGKSHSIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVYYKKIGRIPATWKYKSVVA 146
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_CENSY (30S ribosomal protein S15P/S13e OS=Cenarchaeum symbiosum GN=rps15p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.351e-31 Identity = 64/146 (43.84%), Postives = 95/146 (65.07%), Query Frame = 2 Query: 68 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTA 505 MGR+HS G S S P PSW++ +VED I K+AK+GL PSQIG LRD H I + +TG + +I++ HG PE+PEDL ++++KAV +++HL N+ D+ + L L+E+++HRL YYK+ ++P WKY+S A Sbjct: 1 MGRLHSHRHGKSHSIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVHRLDVYYKRIGRIPKDWKYKSVVA 145
BLAST of CK932900 vs. ExPASy Swiss-Prot
Match: RS15_PYRCJ (30S ribosomal protein S15P/S13e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps15p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30 Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 2 Query: 92 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 514 KG S+S P T P+W++ + ++VE + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ K+P + Y S L Sbjct: 9 KGRSSSVRPPHPTVPTWIQYTPEEVEQLAVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIKQELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKIPQDFVYNPEALSHL 149 The following BLAST results are available for this feature:
BLAST of CK932900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932900 ID=CK932900; Name=CK932900; organism=Citrus sinensis; type=EST; length=809bpback to top |