CK932923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.351e-53 Identity = 104/183 (56.83%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+ M GV S KDEL+L GNDIELVS SAALI Q VKNKDIRKFLDGIY Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDEWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 3.705e-52 Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 M+TI S++ + IP +K + A+V+ + G RG L R FKHL LD ++ KR LK++ WFG++K AA+RT SH+ N+I GVT G++YKMR VYAHFPIN NN IEIRNFLGEK +R+ +M GVTV+ S KDEL+++GNDIE VS SAALI Q VKNKDIRKFLDG+Y Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLY 178
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.838e-52 Identity = 100/183 (54.64%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 MK I++++ + IP+G+ V + ++++ V+GPRG L R+FKHL +D ++ R LK++ WFGS+K AA+RT SHV N+I GVTKG++YKMR VYAHFPIN N IEIRNFLGEK +R+ M GVTV+ S K KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+Y Sbjct: 1 MKQIVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 178
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 9.125e-51 Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 MK I SS + IP+ V V + + ++V GPRG LS+ F H ++D +L+ GK++L +D WFG+RK A I+T S + N+ITGVTKGY YKMRFVYAHFPIN ++ + + +EIRNF GEK VR+ ++LDG+T R++K KDE+VL GN +EL+S+S A I + +K KD+RKFLDGIY Sbjct: 1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLV-----GKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIY 178
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48 Identity = 93/183 (50.82%), Postives = 127/183 (69.40%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 MK I S++T+ P+GV + +++ V GPRG + +DF+HL+++ E GK L++ WFG RK AAIRT SH+ N+I GVT G+RYKMR VYAHFPIN ++ + N+ +EIRNFLGEK VR+ + +GV S KDE+V++GND++ VS++AA I Q VK KDIRKFLDGIY Sbjct: 1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEM-----ERIGKSTLRVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIY 178
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.967e-46 Identity = 94/185 (50.81%), Postives = 131/185 (70.81%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 MK I + + ++IP+GV V I +++++V GPRG L+++ KH+++ F + + +K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNFLG+KK+R + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKFLDGIY Sbjct: 1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 5.181e-46 Identity = 93/185 (50.27%), Postives = 131/185 (70.81%), Query Frame = 1 Query: 88 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 MK I + + +++P+GV V I +++++V GPRG L+++ KH+++ F + + +K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNFLG+KK+R + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKFLDGIY Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.729e-45 Identity = 91/182 (50.00%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 91 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 + I ET+ IP+GV V I A+++ V+GPRG L ++ + ++++ + +K W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFLGE+ R L GVTV S VKDE++++GN +E VS+SAA I Q C+V+NKDIRKFLDGIY Sbjct: 3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIELKKQGNT------IKFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIY 178
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.713e-44 Identity = 91/182 (50.00%), Postives = 121/182 (66.48%), Query Frame = 1 Query: 91 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 + I ET+ IP GV V I A+ + V GPRG L ++ +H++++ + +K W GSRK +A IR+ S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFLGE+ R L GVTV S VKDE++L+GN +E VS+SAA I Q C+V+NKDIRKFLDGIY Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNT------IKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIY 178
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.349e-36 Identity = 79/183 (43.17%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 91 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKV-KDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 K + +E + +P+GV+V I+ + V+GP+G+L+RDF H + ++E GK K+ ++A+F +R+ A + T +H+ N+ITGVTKG+RYK++ VY+HFP+ + + IE NFLGEK R A ++ GVTV KV KD+++++G DIE V ++AA I Q VK+KD R F+DGIY Sbjct: 3 KAVYVAEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGK-KVVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIE--NFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIY 178 The following BLAST results are available for this feature:
BLAST of CK932923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932923 ID=CK932923; Name=CK932923; organism=Citrus sinensis; type=EST; length=638bpback to top |