CK932923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL6_PICTO (50S ribosomal protein L6P OS=Picrophilus torridus GN=rpl6p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14 Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 1 Query: 121 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 +PD V+ + ++++G G+ SR F+ + ++ +KI ++ T + T S LI GVTKG+ Y M+ + HFP+ S+ + +E NFLGEK R A ++DG V VK D + ++G D + +AA I + ++++ D R F DGI+ Sbjct: 12 LPDDVQATMENNELKIKGKLGEASRIFRDNYVKAYIEGSS------VKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMRVSVRGDKLIVE--NFLGEKSPRSAKIVDGCKV----SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIF 172
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL6_THEAC (50S ribosomal protein L6P OS=Thermoplasma acidophilum GN=rpl6p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 54/178 (30.34%), Postives = 91/178 (51.12%), Query Frame = 1 Query: 106 SETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTV-IRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 + ++ IPDG KV I+ + + +S++F N L+ D T +KI+A + + T S + N+I G+ G++Y+M+ Y+HFP+ S+ K + I NF GE+ R A+++ TV ++ D+V + G + V +AA I + +K D R F DGIY Sbjct: 7 ARSIKIPDGFKVSISGTTVTISYGGKTISKNFA--NNYVKLVEDGST----IKINASKNNSMVRGIVGTWASEINNMIKGLKDGFQYEMKIDYSHFPMRVSV--KGKTVVIENFFGERSPRTAEIVGDTTVTVKGDRV----YIAGISKKDVGETAANIERSTIIKGFDPRVFQDGIY 172
BLAST of CK932923 vs. ExPASy Swiss-Prot
Match: RL6_THEVO (50S ribosomal protein L6P OS=Thermoplasma volcanium GN=rpl6p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.288e-12 Identity = 51/178 (28.65%), Postives = 90/178 (50.56%), Query Frame = 1 Query: 106 SETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKADMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIY 636 + ++IP VKV ++ ++ + KL + F + L+ ++ K+KI + + + T S + N++ G+ +G++Y+M+ Y+HFP+ S+ K + I NF GE+ R A+++ V VK D L L+G + V +AA I + +K D R F DGIY Sbjct: 7 ASVIEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYV--RLLVEDN----KIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMRVSV--KGKTVVIENFFGERSPRTAEIVGETQV----SVKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIY 172 The following BLAST results are available for this feature:
BLAST of CK932923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932923 ID=CK932923; Name=CK932923; organism=Citrus sinensis; type=EST; length=638bpback to top |