CK932927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSFSSKGEDSPMNGDGIDAKEVKQP 300 L YD+L+ EL++LF +G L P+K W I+YTD E DMM+VGDDPW +FC +V KI +YTKEEV N + S E + + + + V QP Sbjct: 686 LNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCL-EQAALMMEASKSSSVSQP 779
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16 Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNS 225 L YD+LI EL++LF+ G+L A + W I +T++E D MLVG+DPW EFC MV+KIFIY+KEEV + S Sbjct: 531 LNGYDQLILELEKLFDLKGQLQA-RNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKS 599
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEE 207 L Y +L ++L+++F+ G+L K W +VYTDDE DMMLVGDDPW EFC MV++I+IY+ EE Sbjct: 568 LNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEE 631
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNS 225 L YD+LI EL++LF+ G+L + W I +TD +G MLVGDDPW EFC MV+KI IY+KEEV + S Sbjct: 532 LNGYDQLILELEKLFDIKGQLQT-RNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKS 600
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNS 225 L YD+LI EL++LF+ G+L + W I +TD +G MLVGDDPW EFC MV+KI IY+KEEV + S Sbjct: 516 LNGYDQLILELEKLFDLKGQLQT-RNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKS 584
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFM_ARATH (Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.583e-13 Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKM 219 ++ Y++LI +L++LF+ EL + W IV+T++EG MLVGDDPW EFC M ++IFI +KEE+ KM Sbjct: 529 MHGYNQLIQKLEELFDLKDELRT-RNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKM 595
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTK 201 L YD+LI EL++LF+ G+L + W I +TD + D MLVGDDPW EFC MV+KI I+ + Sbjct: 530 LNGYDQLILELEELFDLKGQLQT-RNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIFKR 590
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFI 192 L YD+LI EL++LF+ G+L + W I +TD + D MLVGDDPW EFC MV+KIFI Sbjct: 532 LNGYDQLILELEKLFDIKGQLQT-RNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFI 192 L YD+LI EL++LF+ G+L + W I++T + D MLVGDDPW EFC MV++I+I Sbjct: 532 LNGYDQLILELEKLFDLKGQLQT-RNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589
BLAST of CK932927 vs. ExPASy Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 16 LYNYDELIAELDQLFEFDGELMAPKKNWIIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKM 219 L Y++L+ EL+++F + K+ W + +TDDEGD M VGDDPW EFC MVRKI +Y E+ K+ Sbjct: 616 LDGYEQLMNELEEMFN----IKDLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679 The following BLAST results are available for this feature:
BLAST of CK932927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932927 ID=CK932927; Name=CK932927; organism=Citrus sinensis; type=EST; length=753bpback to top |