CK932928

Overview
NameCK932928
Unique NameCK932928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932928 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27
Identity = 79/193 (40.93%), Postives = 111/193 (57.51%), Query Frame = 1
Query:  139 SDALYQYILETSVYPREAESMKELRELTAKHPWN-VMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFMFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAP-PDAPLRKYVRYYRDFV 711
            S AL  Y    SV  RE   ++EL ++TA+ P    M    +E QFL +L++LV A+  +EIG +TGYS L  A ALP  G+I+  DI+ +   +G P  Q+AGV   ID R G A   L  L ++    G+FD +FVDADK  YL+Y+++ + LV+ GG++  DNTL+ G V  P  D P    VR   D +
Sbjct:    8 SPALLDYA--RSVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADPAADDPDTVAVRTLNDLL 197          
BLAST of CK932928 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.737e-25
Identity = 61/155 (39.35%), Postives = 99/155 (63.87%), Query Frame = 1
Query:  202 KELRELTAKH-PWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFMFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAP 663
            KEL + T ++   ++M T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G V  P
Sbjct:   36 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 189          
BLAST of CK932928 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25
Identity = 60/155 (38.71%), Postives = 99/155 (63.87%), Query Frame = 1
Query:  202 KELRELTAKH-PWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFMFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAP 663
            KEL + T ++   ++M T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G V  P
Sbjct:   35 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 188          
The following BLAST results are available for this feature:
BLAST of CK932928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY1.421e-2740.93O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI1.737e-2539.35Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI3.869e-2538.71Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_H05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932928 ID=CK932928; Name=CK932928; organism=Citrus sinensis; type=EST; length=738bp
GCGGGGACTCAAGTTACCCTTTAAAACTCCANNNTCCAACATCAAAAGAA
AAGACTTGCCCCAATGGCTTCCAACGCAGAAGATCAACAAAACCAACAAG
GCGGACACAAGGAAGTTGGCCACAAGAGCCTGCTCCAATCCGATGCCCTC
TACCAGTATATTCTTGAAACCAGTGTGTACCCAAGAGAGGCTGAATCAAT
GAAGGAGCTTAGAGAATTGACTGCCAAACATCCATGGAACGTTATGACAA
CGTCGGCAGACGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTGGTCAAT
GCAAAGAACACAATGGAGATTGGAGTCTACACAGGCTACTCTCTTTTGGC
CACTGCCCTTGCCCTTCCTGATGACGGAAAGATTTTGGCCATGGACATCA
ACAGAGAAAATTATGAATTGGGGCTGCCAGTTATCCAAAAAGCTGGTGTT
GCTCACAAGATTGACTTCAGAGAAGGCCCTGCCCTGCCTGTTCTTGACCT
ACTGATCCAAGATGAGAAGAACCATGGGTCCTTTGACTTCATGTTCGTGG
ACGCTGATAAGGACAACTACCTAAACTACCACAAGAGGTTGGTTGAGTTG
GTGAAGGTTGGAGGGGTGATCGGGTACGACAACACCCTATGGAACGGATC
CGTCGTGGCGCCACCTGATGCTCCCCTTAGGAAGTACGTTAGGTATTACC
GAGACTTCGTCTTGGAGCTCAACAAGGCCCTTGCTGCT
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