CK932929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 198.364 bits (503), Expect = 3.225e-50 Identity = 90/186 (48.39%), Postives = 138/186 (74.19%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPT 699 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+D K++TV ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ D++V+S E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT 212
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50 Identity = 90/186 (48.39%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPT 699 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+D K++TV ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ D++VVS E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST 212
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50 Identity = 90/186 (48.39%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPT 699 +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+D K++TV ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ D++VVS E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T Sbjct: 27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST 212
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.502e-50 Identity = 90/168 (53.57%), Postives = 123/168 (73.21%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNR 657 YD + KLLL+GDSGVGKSCLLLRF +D + S+I+TIG+D KIRT+E GK +KLQ+WDTAGQERFRTIT++YYRGA GI+++YDVTD SF NV+ W + ++A+E+ LVGNKCD + VS E + A ++ +PF+E SAK + NV+ F + + I+ + Sbjct: 11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.502e-50 Identity = 93/199 (46.73%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 115 EPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM------ASQPAMNNARP 693 EPP + +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+D K++TV + K +KLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL D++VV E + AD++G F E SAK+++NV+Q F + I ++M +S P N P Sbjct: 6 EPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP 204
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.502e-50 Identity = 95/204 (46.57%), Postives = 141/204 (69.12%), Query Frame = 1 Query: 76 PGPISSWTGSILREPPQHL---IAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL-DSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPA 675 PGP + G PPQ + + YD FK++L+GDSGVGK+CLL+RF D ++L ++IST+G+D + + ++ DG VKLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T +VV E + A E G+PFMETSA+ +NV+ AF A+ ++K R A P+ Sbjct: 40 PGPEAPPNG-----PPQSIRPSLGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.186e-50 Identity = 87/170 (51.18%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA 663 +DY+FKLL+IG+S VGK+ L R+ DDS+ +++ST+G+D K++TV + K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W +I Y+ EN +LVGNKCD+ ++VVS + + AD++G+ F ETSAK+++NV+ F + I ++MA Sbjct: 19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMA 188
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50 Identity = 88/175 (50.29%), Postives = 131/175 (74.86%), Query Frame = 1 Query: 154 YDYLFKLLLIGDSGVGKSCLLLRFADDSYL-DSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPA 675 YD FK++L+GDSGVGK+CLL+RF D ++L ++IST+G+D + + ++ DG VKLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T ++VV E + A E G+PFMETSAK +NV+ AF A+ ++K R P+ Sbjct: 61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.226e-49 Identity = 93/199 (46.73%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 115 EPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM------ASQPAMNNARP 693 EPP + +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+D K++TV + K +KLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL D++VVS E + A ++G F E SAK+++NV+Q F + I ++M +S P N P Sbjct: 6 EPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP 204
BLAST of CK932929 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.731e-49 Identity = 94/173 (54.34%), Postives = 132/173 (76.30%), Query Frame = 1 Query: 142 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDLKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 660 M+ EY++LFK +L GDSGVGK+ +L R DD++ +++I TIG++ KI+TV +GK +KLQIWDTAG++RFR + +S+YRG HG+IIVYDVTDQ SF NV W+ +I RYA+ENV K+++GNK DL +KVV A+ FAD + IPF E SAK S+N+E+AF+++ NR+ Sbjct: 1 MSKEYEHLFKFVLAGDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRI 171 The following BLAST results are available for this feature:
BLAST of CK932929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932929 ID=CK932929; Name=CK932929; organism=Citrus sinensis; type=EST; length=705bpback to top |