CK932933

Overview
NameCK932933
Unique NameCK932933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_DESPS (LL-diaminopimelate aminotransferase OS=Desulfotalea psychrophila GN=dapL PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.292e-28
Identity = 70/170 (41.18%), Postives = 98/170 (57.65%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY--KDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            ++ N N  KLQA YLF +IA+R A    + P+ EVI LGIGD T  +   + +A  +    ++    + GYG EQG   LR AIA   +  +  GI   +IFVSDGAKCD S +Q +F +   +A+ DP YP Y+D++V+ G+TG F     +Y  I Y+  T EN F P
Sbjct:    2 ITINENYLKLQASYLFSDIAKRVATFQEENPEKEVIKLGIGDVTRGLTPSVIAAFHQAVDEMANDSTFHGYGPEQGYAFLREAIAENDFQSRGAGIVADEIFVSDGAKCDTSNIQEIFSAETKIAIPDPVYPVYLDTNVMAGRTGLFADG--RYQNIVYLDSTKENNFVP 169          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOLS (LL-diaminopimelate aminotransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.668e-28
Identity = 68/167 (40.72%), Postives = 95/167 (56.89%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI RR        P A+VI LGIGD T P+   +  A       L+T + ++GYG EQG   L  AI    YK LG++    ++F+SDG+KCD + +  +F  +  +A+ DP YP Y D++V++G+TGE  +    Y  I Y+ C   N F P
Sbjct:    5 NDNYLKLKAGYLFPEIGRRVREFTAANPSAKVIRLGIGDVTRPLAPTVLKAFHAAVDDLATTDQFAGYGPEQGYDWLINAIIEKSYKPLGVDLKTEEMFISDGSKCDCANILDIFALDNVVAIGDPVYPVYNDTNVMIGRTGEADEKG-YYQNIVYLPCNEANNFIP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_HELMI (LL-diaminopimelate aminotransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.708e-28
Identity = 69/167 (41.32%), Postives = 92/167 (55.09%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL   YLF EIARR        P+A++I LGIGD T P+   +  A+ K    +   E + GYG EQG   L   I    YK  GI+ G  ++FVSDG+KCD +  Q + G    +AV DP YP YVDS+V+ G++G F +  + +  I Y+ CT  NG  P
Sbjct:    5 NENYLKLPGSYLFSEIARRVNQFKKANPEADIIRLGIGDVTRPLVPAVVEAMKKAVDEMGRAETFRGYGPEQGYDFLIGQIIENDYKPRGIDLGMDEVFVSDGSKCDTANFQEILGIGNIVAVTDPVYPVYVDSNVMAGRSGAFNEKGQ-FDDIVYLPCTEANGMKP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_EUBE2 (LL-diaminopimelate aminotransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dapL PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.708e-28
Identity = 67/167 (40.12%), Postives = 94/167 (56.29%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL   YLF  I ++ AA+    PD E+I LGIGD T+P+   +  AL K    +   E + GY  + G + LR+AIA   YK  G  I   +IFVSDGAK D   +  +F  +  +AV DP YP YVD++ + G+TG++  + + +  + YM CTAE  F P
Sbjct:    5 NDNYLKLPGSYLFSTIGKKVAAYQQANPDKEIIRLGIGDVTQPLAPAVIDALHKSVDEMGHAETFHGYAPDLGYEFLRSAIADHDYKKRGCDISADEIFVSDGAKSDSGNIGDIFSVDNKIAVCDPVYPVYVDTNAMAGRTGDYIPEKQAWSNVVYMPCTAETNFAP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_METST (LL-diaminopimelate aminotransferase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=dapL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.309e-27
Identity = 65/161 (40.37%), Postives = 92/161 (57.14%), Query Frame = 2
Query:  281 LQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            +Q  YLF EIARR   +  + PDA +I +GIGD T P+ + +  A  +    L   + + GYG EQG   L   +    YK LG+E    ++F+SDGAKCD    Q +F  +  +AV DP YP YVDS+V+ G++G+  +D   Y  I Y+  T+EN F P
Sbjct:   12 IQNNYLFVEIARRVDEYQKENPDANLIKMGIGDVTRPLAKSVVEAFKRAVDELGDADTFRGYGPEQGYDFLIEDVIENDYKPLGVELKNSEVFISDGAKCDTGNFQELFSKDNIIAVTDPVYPVYVDSNVMAGRSGKMGEDG-FYENIVYLPATSENDFVP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_CHLCV (LL-diaminopimelate aminotransferase OS=Chlamydophila caviae GN=dapL PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.145e-26
Identity = 64/168 (38.10%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            + RN N  KL+  YLF  I ++  A    +PD  +I L IGDTT+P+   +     K    L   E Y GYG E G   LR  ++  FY+   +   +IF+SDGAK DI RL  +FG   T+AVQDPSYP Y+D++++ G             K+  + C  E  FFP
Sbjct:    1 MQRNNNFSKLETSYLFSSIRQKIRAFREAHPDVSIIDLSIGDTTQPLHTAVMDTFTKSVQKLGNPETYRGYGPELGLSTLREKLSEVFYQG-KVSPEEIFISDGAKMDIFRLLSLFGPGKTIAVQDPSYPVYIDTALLAGAK-----------KVIKLPCRKETDFFP 156          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_BACTN (LL-diaminopimelate aminotransferase OS=Bacteroides thetaiotaomicron GN=dapL PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.778e-26
Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N +  KL   YLF +IA++     + +P  ++I LGIGD T+P+P+    A+ K    L++++ + GYG EQG   L  AI    +   GI     +IFV+DGAK D   +  +   + ++ V DP YP Y+DS+V+ G+ G  ++   K+  + YM CT+EN F P
Sbjct:    5 NEHFLKLPGSYLFSDIAKKVNTFKITHPKQDIIRLGIGDVTQPLPKACIEAMHKAVEELASKDTFRGYGPEQGYDFLIEAIIKNDFAPRGIHFSPSEIFVNDGAKSDTGNIGDILRHDNSVGVTDPIYPVYIDSNVMCGRAGVLEEGTGKWSNVTYMPCTSENDFIP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_BACFR (LL-diaminopimelate aminotransferase OS=Bacteroides fragilis GN=dapL PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.778e-26
Identity = 61/167 (36.53%), Postives = 92/167 (55.09%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N +  KL   YLF +IA++     + +P  ++I LGIGD T P+P+    A+ K    +++ E + GYG EQG   L  AI    Y   GI     ++FV+DGAK D   +  +   + ++ V DP YP Y+DS+V+ G+ G    ++ K+  + YM CTAEN F P
Sbjct:    5 NEHFLKLPGSYLFSDIAKKVNTFKITHPKRDIIRLGIGDVTRPLPKACIEAMHKAVEEMTSAETFRGYGPEQGYDFLIEAIIKNDYAPRGIHLSPTEVFVNDGAKSDTGNIGDILRHDNSVGVTDPIYPVYIDSNVMCGRAGVLDTESGKWSNVTYMPCTAENHFIP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_BACFN (LL-diaminopimelate aminotransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dapL PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.778e-26
Identity = 61/167 (36.53%), Postives = 92/167 (55.09%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N +  KL   YLF +IA++     + +P  ++I LGIGD T P+P+    A+ K    +++ E + GYG EQG   L  AI    Y   GI     ++FV+DGAK D   +  +   + ++ V DP YP Y+DS+V+ G+ G    ++ K+  + YM CTAEN F P
Sbjct:    5 NEHFLKLPGSYLFSDIAKKVNTFKITHPKRDIIRLGIGDVTRPLPKACIEAMHKAVEEMTSAETFRGYGPEQGYDFLIEAIIKNDYAPRGIHLSPTEVFVNDGAKSDTGNIGDILRHDNSVGVTDPIYPVYIDSNVMCGRAGVLDTESGKWSNVTYMPCTAENHFIP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PARD8 (LL-diaminopimelate aminotransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dapL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25
Identity = 60/167 (35.93%), Postives = 96/167 (57.49%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N +  KLQ  YLF +IA++  +  + +P  ++I +GIGD T+P+   +  A+ K    +++++ + GYG EQG   L  AI    Y   G  IE  ++F+SDGAK D   +  +   + ++ V DP YP Y+DS+V+ G+TG  +    K+  + Y+ CTAEN F P
Sbjct:    5 NEHFLKLQNNYLFSDIAKKVNSFKVTHPKDKIIRMGIGDVTQPLAPAVIEAMHKAVEEMASKDTFHGYGPEQGYPFLIDAIIKNDYASRGVFIEPSEVFISDGAKSDCGNIGDMLRHDNSIGVTDPVYPVYIDSNVMSGRTGVLENG--KWSDVVYIPCTAENNFVP 169          
The following BLAST results are available for this feature:
BLAST of CK932933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DAPAT_DESPS2.292e-2841.18LL-diaminopimelate aminotransferase OS=Desulfotale... [more]
DAPAT_GEOLS6.668e-2840.72LL-diaminopimelate aminotransferase OS=Geobacter l... [more]
DAPAT_HELMI8.708e-2841.32LL-diaminopimelate aminotransferase OS=Heliobacter... [more]
DAPAT_EUBE28.708e-2840.12LL-diaminopimelate aminotransferase OS=Eubacterium... [more]
DAPAT_METST3.309e-2740.37LL-diaminopimelate aminotransferase OS=Methanospha... [more]
DAPAT_CHLCV2.145e-2638.10LL-diaminopimelate aminotransferase OS=Chlamydophi... [more]
DAPAT_BACTN4.778e-2635.93LL-diaminopimelate aminotransferase OS=Bacteroides... [more]
DAPAT_BACFR4.778e-2636.53LL-diaminopimelate aminotransferase OS=Bacteroides... [more]
DAPAT_BACFN4.778e-2636.53LL-diaminopimelate aminotransferase OS=Bacteroides... [more]
DAPAT_PARD86.900e-2535.93LL-diaminopimelate aminotransferase OS=Parabactero... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932933 ID=CK932933; Name=CK932933; organism=Citrus sinensis; type=EST; length=758bp
GGGGAGTGACAGAGCACTCGAAAACATCCTGTTTTGGTGGTAGTAATTAG
TTGGTCAAAATTCAGCAAACATGTCGCTAGCTCCTCAATCCATTTCCACG
TCAATGATCTCTTCTTCTTCATCTGCTTTCTTATCCCCATCGAACTTGAA
CTTCAATTCAAGAAGACAGAATGCTTGGGTTCAAGCGAAGAGAATCAGTG
TTTGCAAATGCGTTGCCGCGCCTCAAGAAGAGAAAATTGCATACAAGACA
AAAGTCTCTCGTAATGGAAACTTGGGAAAACTTCAAGCAGGATACCTCTT
TCCAGAGATTGCTCGAAGAAAGGCTGCACACATGCTGAAATACCCAGATG
CAGAAGTGATTAGTCTTGGAATCGGTGACACCACTGAGCCCATTCCCGAA
GTTATAACTTCTGCATTGGCTAAGAGATCTTATGCATTGTCCACACAAGA
GGGCTATAGTGGTTATGGAGCTGAACAAGGTGAAAAGCCATTGAGAGCTG
CAATTGCTTCAACATTTTATAAGGACCTTGGCATAGAGGAAGGCGATATA
TTTGTTTCTGATGGTGCAAAATGTGACATATCCCGCCTTCAGATTGTTTT
TGGTTCTAATGTTACTATGGCAGTTCAAGATCCATCATACCCGGCTTATG
TAGACTCGAGTGTCATTATGGGCCAAACTGGAGAGTTTCAAAAGGATGCC
GAGAAGTACGGAAAGATTGAATACATGAGGTGTACTGCAGAGAATGGTTT
TTTTCCTG
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