CK932937

Overview
NameCK932937
Unique NameCK932937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length452
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5664 contig Csv1_Contig5664:61..512. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.741e-25
Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1
Query:   82 MAKMSLIFSLFVGLLMVVLVSSA---KFDDLYQTSWAFDH---VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            M   S + ++   +L+V L  SA    F D +  +W  DH   +   G+ L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS G  H+E  FEFLGN TG+PY++ TNV+  G G
Sbjct:    1 MGPSSSLTTIVATVLLVTLFGSAYASNFFDEFDLTWG-DHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKG 128          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.970e-25
Identity = 56/121 (46.28%), Postives = 84/121 (69.42%), Query Frame = 1
Query:  106 SLFVGLLMVVLVSSA---KFDDLYQTSWAFDH---VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            ++ + LL+V +  +A    F++ +  +W  +H   +   G  L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS+GP H+E  FEFLGN TG+PY++ TNV+  G G
Sbjct:    8 TVLMTLLVVTMAGTAFSGSFNEEFDLTWG-EHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPTHDEIDFEFLGNETGKPYVLHTNVFAQGKG 127          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.879e-25
Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = 1
Query:  109 LFVGLLMVVLVSSA--KFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            + VG+++  +V++    F   +  +W  D  +    G  L L+LD  SG+GF SK +YLFG++ +Q+KLV G+SAGTVTA+Y+SS GP H+E  FEFLGN +G+PY++ TN++  G G
Sbjct:   15 MLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 5.066e-25
Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 1
Query:   76 SSMAKMSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFD--HVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            S++  MS+  SLF+GL ++++V    F+     +W     ++  +G  L L LD  SG+GF SK++YL+GKV +QIKLV G+SAGTVT FY+ S G   +E  FEFLGN +G+PY+V TNVY  G G
Sbjct:    4 STLLVMSI--SLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKG 128          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24
Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 1
Query:   82 MAKMSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSD---GPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            M  + L  +  +    +    +  F+D +   W+ +H     DG+   L+LDN +G GF +K  Y FG  S+++KLVGGDSAG VTA+YM S+   GP  +E  FEFLGN TG+PY++QTNVY NG G
Sbjct:    1 MTALFLFMTALMASSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTG 128          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.284e-24
Identity = 63/132 (47.73%), Postives = 79/132 (59.85%), Query Frame = 1
Query:   76 SSMAKMSLIFSLFVGLLMVVLVSSAKFDDL-----YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            S  A M+L   L V   MV+ +   K  D+     Y  +WAFDH +    G  L+L LD Y+G GF SK  YLFG  S+ IKL  GD+AG VTAFY+SS    H+E  FEFLGN TG+P ++QTNV+  G G
Sbjct:    6 SPWALMALF--LMVSSTMVMAIPPRKAIDVPFGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKG 135          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.284e-24
Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 1
Query:  109 LFVGLLMVVLVSSAKFDDLYQTSWAFD--HVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            L + LL+++ +S+  F D +  +W     ++   G  L   LD  SG+GF SK +YLFGK+ +++KLV G+SAGTVTA+Y+SS G   +E  FEFLGN TG+PY++ TNV+  G G
Sbjct:   11 LLLSLLLLISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKG 126          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 4.288e-24
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 1
Query:  109 LFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            L   LL+++ V++  F D +  +W          G  L   LD  SG+GF SK +YLFGK+ ++IKLV G+SAGTVTA+Y+SS G   +E  FEFLGN TG+PY++ TNV+  G G
Sbjct:   12 LLASLLILIGVATGSFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKG 127          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 4.288e-24
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1
Query:   94 SLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGV 447
            S+I SL + +    +VSS  F+  +  +W+  HV    DG +  L LD  SGA F+S   +LFG++ ++IKL+ G S GTV A+YMSSD PN +E  FEFLGN  G+PY++QTNVY  G+
Sbjct:   17 SIISSLLLWVSQASVVSSGDFNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPNRDEIDFEFLGNVNGQPYILQTNVYAEGL 136          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.248e-23
Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 1
Query:  166 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            Y  +WAFDH +    G  L+L LD Y+G GF SK  YLFG  S+ IKL  GD+AG VTAFY+SS    H+E  FEFLGN TG+P ++QTNV+  G G
Sbjct:   38 YVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKG 134          
The following BLAST results are available for this feature:
BLAST of CK932937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
XTH15_ARATH1.741e-2546.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH2.970e-2546.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN3.879e-2544.92Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH21_ARATH5.066e-2547.24Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH1.474e-2443.75Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH3.284e-2447.73Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH3.284e-2445.69Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH4.288e-2446.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH4.288e-2446.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.248e-2354.64Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932937 ID=CK932937; Name=CK932937; organism=Citrus sinensis; type=EST; length=452bp
CTTCAACTTCCCTCCACTTCACTGGGCTTGCTCTGCTCATTCGCTTACTT
CCTCTCCCCGTTCTTCTGTCTTCATTCTTCAATGGCTAAAATGTCTTTGA
TTTTCAGTCTGTTTGTGGGTCTTTTAATGGTGGTTTTGGTCAGCTCAGCT
AAGTTTGATGATCTTTATCAAACAAGCTGGGCTTTTGATCATGTTCAGTA
TGATGGGGACACTCTCAAGCTTAACCTCGATAATTATTCCGGAGCTGGGT
TTGCGTCAAAGAGCAAGTATTTGTTTGGGAAAGTCTCCATCCAAATTAAA
CTTGTAGGGGGTGACTCTGCTGGAACTGTCACTGCCTTCTATATGTCATC
AGACGGTCCAAATCACAACGAGTTCTATTTTGAGTTCCTGGGGAACACTA
CAGGAGAGCCATACTTAGTCCAAACCAATGTTTATGTGAATGGTGTGGGC
AA
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