CK932950

Overview
NameCK932950
Unique NameCK932950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.104e-53
Identity = 109/162 (67.28%), Postives = 131/162 (80.86%), Query Frame = 1
Query:  232 SSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGG-ETLTVAQVAAIATS--STNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            S+ D LNWG   E+LKGSHLEEVK MVAEYR+ V+++GG ETLTV++VAA+A       V+LSESAREGV +S  W++++++KG   YGVTTGFGA S+R+T+ G ALQKE++RFLN  IFG  TE SHTLP S TRAAMLVRVNTLLQGYSGIRFEILEAI
Sbjct:   17 SNTDPLNWGNAVESLKGSHLEEVKGMVAEYREAVIHVGGGETLTVSKVAAVANQYLQAKVDLSESAREGVDSSCKWIVDNIDKGIPIYGVTTGFGANSNRQTQEGLALQKEMVRFLNCAIFGYQTELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAI 178          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 7.245e-50
Identity = 103/160 (64.38%), Postives = 120/160 (75.00%), Query Frame = 1
Query:  241 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA----TSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            D LNWG  A  + GSHL+EVKRMVA++R+P+V + G TL V QVAA+A     +   VEL E AR  VKASS W++  +  G D YGVTTGFG TSHRRTK+G ALQ EL+R LNAGIFG G++  HTLP  T RAAMLVR+NTLLQGYSGIRFEILEAI
Sbjct:   11 DPLNWGAAAAEMAGSHLDEVKRMVAQFREPLVKIQGATLRVGQVAAVAQAKDAAGVAVELDEEARPRVKASSEWILNCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVELLRHLNAGIFGTGSD-GHTLPSETVRAAMLVRINTLLQGYSGIRFEILEAI 169          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.239e-41
Identity = 94/172 (54.65%), Postives = 120/172 (69.77%), Query Frame = 1
Query:  202 GLCKNDNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEY-RKPVVNLGGETLTVAQVAAIAT-SSTNVEL-SESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            GLC +  +  S  D LNW   A+ ++GSH EEVK MV  Y     +++ G++LT++ VAA+A  S   V+L + +A+  V+ SSNWV+  M KGTD+YGVTTGFGATSHRRT  G  LQKELIRFLNAG+ G   E  + L   TTRAAMLVR NTLLQGYSG+R++ILE +
Sbjct:   19 GLCTD--FGSSGSDPLNWVRAAKAMEGSHFEEVKAMVDSYFGAKEISIEGKSLTISDVAAVARRSQVKVKLDAAAAKSRVEESSNWVLTQMTKGTDTYGVTTGFGATSHRRTNQGAELQKELIRFLNAGVLGKCPE--NVLSEDTTRAAMLVRTNTLLQGYSGVRWDILETV 186          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34
Identity = 74/85 (87.06%), Postives = 76/85 (89.41%), Query Frame = 1
Query:  454 MESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            MESM+KGTDSYGVTTGFGATSHRRTK GGAL KELIRFLNAGIFG   ES HTL  S TRAAMLVR+NTLLQGYSGIRFEILEAI
Sbjct:    1 MESMDKGTDSYGVTTGFGATSHRRTKQGGALHKELIRFLNAGIFGTNGESGHTLAPSATRAAMLVRINTLLQGYSGIRFEILEAI 85          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: PALY_AMAMU (Phenylalanine ammonia-lyase OS=Amanita muscaria GN=PAL PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 51/160 (31.87%), Postives = 87/160 (54.37%), Query Frame = 1
Query:  262 MAETLKGSHLEEVKRMVAEYRKP-VVNLGGETLTVAQVAAIATSSTNVELSES--AREGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTE----------SSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILE 702
            M +T   S   E  R +  Y+    + + G+TL++A VAA A  +  VEL ES   +E V+ S   +   ++ G   YG++TGFG ++  RT     L   L++  + GI    TE          ++ ++P +  R A+L+R+N+L++G+SGIR+E++E
Sbjct:   43 MTKTSALSQFLEAYRELEGYKNGRAIKVDGQTLSIAAVAAAARYNAAVELDESPLVKERVRKSQLAIANKVSTGASVYGLSTGFGGSADTRTDKPMLLGFALLQHQHVGILPTSTEPLDVLPLQDANNTSMPEAWIRGAILIRMNSLIRGHSGIRWELIE 202          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: PALY_RHORB (Phenylalanine ammonia-lyase OS=Rhodotorula rubra GN=PAL PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14
Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 1
Query:  256 GVMAETLKGSHLEEVKRMVAEY-RKPVVNLGGETLTVAQVAAIATSSTNVELSESA--REGVKASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIF---------GNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            G +  T + + L+ V+R++A+      + L G TLT+  V   A    +V++++S   RE + AS  ++   ++     YGVTTGFG ++  RT++  +LQK L+     G+          G G E+S  LP    R AM +RVN+L +G+S +R  +LEA+
Sbjct:   39 GSLLPTTETTQLDIVERILADAGATDQIKLDGYTLTLGDVVGAARRGRSVKVADSPHIREKIDASVEFLRTQLDNSV--YGVTTGFGGSADTRTEDAISLQKALLEHQLCGVLPTSMDGFALGRGLENS--LPLEVVRGAMTIRVNSLTRGHSAVRIVVLEAL 197          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: HUTH_STRP6 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M6 GN=hutH PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13
Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSH--RRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            V+NL GE+LT+  V AIA       + +SA E V AS   V + +++    YGVTTGFG+  +     ++   LQ+ LIR  +A  FG+       LP    RA ML+R+N+L++GYSGIR   +E +
Sbjct:    4 VINLDGESLTIEDVIAIARQGVACRIDDSAIEAVNASRKIVDDIVSEKRVVYGVTTGFGSLCNVSISPEDTVQLQENLIR-THASGFGD------PLPEDAVRAIMLIRINSLVKGYSGIRLSTIEKL 124          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: HUTH_STRP3 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M3 GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13
Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSH--RRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            V+NL GE+LT+  V AIA       + +SA E V AS   V + +++    YGVTTGFG+  +     ++   LQ+ LIR  +A  FG+       LP    RA ML+R+N+L++GYSGIR   +E +
Sbjct:    4 VINLDGESLTIEDVIAIARQGVACRIDDSAIEAVNASRKIVDDIVSEKRVVYGVTTGFGSLCNVSISPEDTVQLQENLIR-THASGFGD------PLPEDAVRAIMLIRINSLVKGYSGIRLSTIEKL 124          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: HUTH_STRP1 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M1 GN=hutH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13
Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSH--RRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            V+NL GE+LT+  V AIA       + +SA E V AS   V + +++    YGVTTGFG+  +     ++   LQ+ LIR  +A  FG+       LP    RA ML+R+N+L++GYSGIR   +E +
Sbjct:    4 VINLDGESLTIEDVIAIARQGVACHIDDSAIEAVNASRKIVDDIVSEKRVVYGVTTGFGSLCNVSISPEDTVQLQENLIR-THASGFGD------PLPEDAVRAIMLIRINSLVKGYSGIRLSTIEKL 124          
BLAST of CK932950 vs. ExPASy Swiss-Prot
Match: HUTH_STRPZ (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=hutH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSNWVMESMNKGTDSYGVTTGFGATSH--RRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAI 708
            V+NL GE+LT+  V AIA       + +SA E V AS   V + +++    YGVTTGFG+  +     ++   LQ+ LIR  +A  FG+       LP    RA ML+R+N+L++GYSGIR   +E +
Sbjct:    4 VINLDGESLTLEDVIAIARQGVACRIDDSAVEAVNASRKIVDDIVSEKRVVYGVTTGFGSLCNVSISPEDTVQLQENLIR-THASGFGD------PLPEDAVRAIMLIRINSLVKGYSGIRLSTIEKL 124          
The following BLAST results are available for this feature:
BLAST of CK932950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
PAL3_PHAVU4.104e-5367.28Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL1_ORYSJ7.245e-5064.38Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_PINTA1.239e-4154.65Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PALY_PERAE1.123e-3487.06Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PALY_AMAMU2.202e-1431.88Phenylalanine ammonia-lyase OS=Amanita muscaria GN... [more]
PALY_RHORB8.366e-1432.52Phenylalanine ammonia-lyase OS=Rhodotorula rubra G... [more]
HUTH_STRP61.093e-1339.06Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_STRP31.093e-1339.06Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_STRP11.093e-1339.06Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_STRPZ1.864e-1339.06Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932950 ID=CK932950; Name=CK932950; organism=Citrus sinensis; type=EST; length=709bp
GCGGGGAGGAAATCCATTATTGTTATAGACTNNNGAATTTCCTTTAGCTC
ANNNNTTCTTCATCACTCCCATTCATTCATTCTTCTTCTTCTTCTTCTTT
CTACAGTTTTGGTATTTTTTGTAATTGCAGTAACATTTACGTAAAACGAT
ATGGAGAGAGGTGCCACTACTGAGAATGGTCACCAGAACGGTGGCCTGGA
GGGTTTGTGCAAGAATGACAATTACAATTACAGTTCTGGGGATGCGTTGA
ACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCATTTGGAGGAAGTG
AAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAACCTCGGTGGTGA
GACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGTCCTCTACGAATG
TGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCCAGCAGTAATTGG
GTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGGCGTTACCACTGG
CTTTGGCGCCACTTCTCATCGGAGAACCAAGAACGGCGGTGCTCTTCAGA
AGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGAAACGGAACAGAG
TCATCTCACACGCTACCTCACTCAACAACAAGGGCAGCCATGCTTGTGAG
GGTTAACACTCTTCTCCAGGGCTACTCTGGCATCCGATTTGAAATCCTGG
AAGCGATCA
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