CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_EXIS2 (Bifunctional protein folD OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=folD PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 122/236 (51.69%), Postives = 155/236 (65.68%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A +IDGK VAQ+ R ++ EEV  L E+  + P L V+++G    SQSYV  K KA  E+G+ S  I LPE+  E+EL+  +  LNA   VHGILVQLPLPKHI+E KV+  I+ EKDVDGFHP+++GK+ +   +P FLPCTP G L L+K   V I G+  VVVGRS IVG PV +L L   ATVT  HS T D  ++ R+ADI+I A G   +I    +KP A VIDVG N VD
Sbjct:    2 AVVIDGKQVAQSYRLKLKEEVARLKEERIQ-PKLTVILIGEDPASQSYVRGKEKAAQEIGMDSDLIRLPEETKESELLHLIERLNADASVHGILVQLPLPKHIDESKVIFAIAPEKDVDGFHPVSVGKMMI--GEPTFLPCTPNGILHLVKEMNVPIAGRHVVVVGRSQIVGKPVGMLFLNESATVTYCHSKTADLGAMTRQADILIVAVGVPKLITADMVKPEAVVIDVGVNRVD 234          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACTPJ (Bifunctional protein folD OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=folD PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A II G AVA+ +++ IAE+++  + +  + PGLAV++VG    SQ YV+ KRK+CAE+GI+S   DLP +  EAEL++ + +LN    V GILVQLPLPK I+  KV   I   KDVDGFHP N+G+L  K   P    CTP G ++LL+ +GV + G  AVVVG SNIVG P+++ LL A  TVT+ HS T D    V +ADIV+A  G+   +KG WIKPGA VIDVG N V+
Sbjct:    3 AHIISGTAVAKQVKANIAEQIQAYTAQDKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAETGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQK--IPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTVTHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIVIDVGINRVE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACTP7 (Bifunctional protein folD OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=folD PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 119/236 (50.42%), Postives = 157/236 (66.53%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A II G AVA+ +++ IAE+++  + +  + PGLAV++VG    SQ YV+ KRK+CAE+GI+S   DLP +  EAEL++ + +LN    V GILVQLPLPK I+  KV   I   KDVDGFHP N+G+L  K   P    CTP G ++LL+ +GV + G  AVVVG SNIVG P+++ LL A  TVT+ HS T D    V +ADIV+A  G+   +KG WIKPGA VIDVG N V+
Sbjct:    3 AHIISGTAVAKQVKANIAEQIQAYTAQDKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAETGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQK--IPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTVTHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIVIDVGINRVE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD3_PSEMY (Bifunctional protein folD 3 OS=Pseudomonas mendocina (strain ymp) GN=folD3 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 121/236 (51.27%), Postives = 162/236 (68.64%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDS 771
            +IDGKA A  + +E+AE+VR L    G VP LAVV+VG    SQ YV  K     E GI+S +  LP   +EA L + + ELNA   VHGILVQLPLP HI+E++VL  ++  KDVDGFH  N+G L+ +GR+ L  PCTP GCL LL+ S   + GK AVV+GRSNIVG P++ LLLKA  +VT+VHS + + +++ R+ADIV+AA G+  ++   W+KPGA VIDVG N +D++
Sbjct:    9 LIDGKAAAARVLAEVAEDVRALKAA-GIVPALAVVLVGDDPASQVYVRNKVLRAEECGIRSLEFKLPADTAEARLQALIAELNADASVHGILVQLPLPAHIDEQRVLQAVTPLKDVDGFHAENVGGLS-QGREVL-TPCTPAGCLRLLQDSCGDLTGKHAVVIGRSNIVGKPMAALLLKAHCSVTVVHSKSANLKTLCRQADIVVAAVGRPRLVDADWLKPGAVVIDVGINRIDEN 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD1_SPHWW (Bifunctional protein folD 1 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD1 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 119/242 (49.17%), Postives = 161/242 (66.53%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKS 783
            A IIDGKA+A  IR+E+A  V  L+ + G  PGLAVV+VG    S  YV  K     + GI+SF+  LP    EA+L+  +  LN   +VHGILVQLPLP+HI  ++VL  I   KDVDGFHP+N+G+L++ G D L +PCTP GC+ LL+      +G +AVV+G+SNIVG PV++LLL+ + TVT+ H  T +   IVR ADIV+ AAG   +++G W++PGA VIDVG N + +  K S
Sbjct:    2 AAIIDGKAIAAAIRAEVAAGVTALTAEGGAAPGLAVVLVGEDPASLVYVGRKIAQTRQAGIRSFEHRLPAGTGEADLLGLIERLNRDDEVHGILVQLPLPRHIRADRVLDAIDPLKDVDGFHPVNVGRLSI-GTDGL-VPCTPLGCMLLLETVIDDFRGLKAVVIGKSNIVGKPVAMLLLERECTVTVTHILTRNLPDIVRTADIVVVAAGSPGLVRGDWVRPGAVVIDVGINRIGEPGKDS 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRPZ (Bifunctional protein folD OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=folD PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.481e-57
Identity = 122/241 (50.62%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA VIDVG N  DD+ K  G
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIVIDVGMNR-DDNGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRPM (Bifunctional protein folD OS=Streptococcus pyogenes serotype M28 GN=folD PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.481e-57
Identity = 122/241 (50.62%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA VIDVG N  DD+ K  G
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKDGAIVIDVGMNR-DDNGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRPG (Bifunctional protein folD OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=folD PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.481e-57
Identity = 122/241 (50.62%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA VIDVG N  DD+ K  G
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIVIDVGMNR-DDNGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRPF (Bifunctional protein folD OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=folD PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.481e-57
Identity = 122/241 (50.62%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA VIDVG N  DD+ K  G
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIVIDVGMNR-DDNGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRPD (Bifunctional protein folD OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=folD PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.481e-57
Identity = 122/241 (50.62%), Postives = 160/241 (66.39%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I   +IK GA VIDVG N  DD+ K  G
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFITKQYIKEGAIVIDVGMNR-DDNGKLIG 241          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_EXIS21.134e-5751.69Bifunctional protein folD OS=Exiguobacterium sibir... [more]
FOLD_ACTPJ1.134e-5750.42Bifunctional protein folD OS=Actinobacillus pleuro... [more]
FOLD_ACTP71.134e-5750.42Bifunctional protein folD OS=Actinobacillus pleuro... [more]
FOLD3_PSEMY1.134e-5751.27Bifunctional protein folD 3 OS=Pseudomonas mendoci... [more]
FOLD1_SPHWW1.134e-5749.17Bifunctional protein folD 1 OS=Sphingomonas wittic... [more]
FOLD_STRPZ1.481e-5750.62Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPM1.481e-5750.62Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPG1.481e-5750.62Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPF1.481e-5750.62Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRPD1.481e-5750.62Bifunctional protein folD OS=Streptococcus pyogene... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
back to top