CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:1..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_GEOKA (Bifunctional protein folD OS=Geobacillus kaustophilus GN=folD PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.919e-61
Identity = 127/237 (53.59%), Postives = 160/237 (67.51%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A II G  +A+TIR+ +A+E   L    G  PGLAV++VG    S SYV  K+KACAEVGI+SF    P  + E  L++K+ ELN  P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +  R   FLPCTP G L +++ +G+ I GK  VVVGRSNIVG PV  L L+  ATVT  HS TPD  +I R+ADI+I A G+A +I    IKPGA VIDVG N +++
Sbjct:    3 AQIISGTEMARTIRTALADEAAQLKAD-GVEPGLAVILVGDDPASHSYVKGKQKACAEVGIRSFLYTFPAAIDEETLLAKIRELNVDPAVHGILVQLPLPDHICEWSVIETIAPEKDVDGFHPINVGKMMIGQR--AFLPCTPHGILVMVQSAGIDIAGKHVVVVGRSNIVGKPVGQLFLREHATVTYTHSKTPDLAAITRQADILIVAVGKARLIGPEHIKPGAVVIDVGVNRLEN 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CHLT3 (Bifunctional protein folD OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=folD PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.096e-60
Identity = 121/247 (48.99%), Postives = 166/247 (67.21%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            ++DGK ++Q I++E+  +V    ++  KVPGL V+IVG    SQ YV  K K+C E+G+ S  I+LP   S+ EL+ K+ +LN  P+VHGILVQ PLPKHI+E  V   I+ EKDVDGFHP N+G+L +   D  F+ CTP G +E+LKR  +  KGK  V+VGRSNIVG P++ L+++     + TVT+ HS TPD  +  ++ADI+IAA G+A  I G  IK GA VIDVG N ++ +  KSGYR
Sbjct:    3 VLDGKKLSQEIKAELKTKVEQYKQEIQKVPGLTVIIVGEDPASQVYVRNKAKSCNEIGMASEVIELPASTSQEELLKKIADLNHNPNVHGILVQQPLPKHIDEFAVTLAIAPEKDVDGFHPENVGRLVLGHLDKCFVSCTPFGIIEILKRYNIETKGKHCVIVGRSNIVGKPMANLMVQKLAYMNCTVTVCHSATPDIATYTKQADILIAAIGKARFITGDMIKAGAVVIDVGINRIEATNTKSGYR 249          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD2_ROSDO (Bifunctional protein folD 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD2 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.096e-60
Identity = 122/243 (50.21%), Postives = 158/243 (65.02%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            ATIIDGKA A  +R+++AE V  + + +G  PGLAVV+VG    SQ YV  K K   E G+ S++  L    SEA+L++ V +LN  P+VHGILVQLPLPKH++E+ ++  I   KDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIKPGA VIDVG N +D   K  G
Sbjct:    3 ATIIDGKAFAAKVRAQVAEHVTRIKQDHGITPGLAVVLVGEDPASQVYVRSKGKQTVEAGMNSYEHKLDADTSEADLLAVVDKLNKDPNVHGILVQLPLPKHLDEDLIINSIDPAKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLREHHGSLSGMNAVVIGRSNIVGKPMAQLLLNDSCTVTIAHSRTKDLPDVVRGADIVVAAVGRPEMVPGDWIKPGATVIDVGINRIDAPEKGEG 243          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BREBN (Bifunctional protein folD OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=folD PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.431e-60
Identity = 128/236 (54.24%), Postives = 165/236 (69.92%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            ATI+ GK VAQ+IR+E+A EV  L +K G VPGL VVIVG    S SYV  K K C EVGI S  I     ++E EL+  + +LN  P+V+GILVQLPLP HI+E  V+  I+ EKDVDGFHP++IG + + G D + LPCTP G +EL+KR+G  + GK AVV+GRSNIVG PVSLLL + +ATVT+ HS T + E   ++ADI++ A G+A MI    +KPGA VIDVG N ++
Sbjct:    3 ATILQGKEVAQSIRAELANEVVEL-KKQGVVPGLTVVIVGDDPASHSYVRGKAKGCEEVGISSEIIRKDADITEEELLVIIQQLNENPNVNGILVQLPLPAHISEHAVIEAIAPEKDVDGFHPISIGNMVL-GNDTM-LPCTPHGIIELIKRTGTQMAGKHAVVIGRSNIVGKPVSLLLQQENATVTMCHSRTQNLEEYTQKADILVVATGRAHMIGKEHVKPGAVVIDVGVNRIE 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_TREDE (Bifunctional protein folD OS=Treponema denticola GN=folD PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.869e-60
Identity = 127/247 (51.42%), Postives = 168/247 (68.02%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKAD--ATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            A IIDG  +A  +R++IA++V  +  K G  P LAV++VG    SQSYV  K  A  EVG+      LPE  ++ EL+  + ELNA   ++GILVQLPLPK I+ + V+  I+ EKDVDGFHP+N+GKL + G D  F+PCTP G + LLKR+GV  KG + V+VGRSNIVG P+S+L++  D  ATVT+ HS T +   + +EADI++AA G+   IK   IK GA VIDVG N +DDSTKKSG+R
Sbjct:    3 AKIIDGARIAADLRADIAKDVEKIKAK-GVQPTLAVILVGNDPASQSYVKGKTNALHEVGMNDRTFRLPETTTQDELLKLIKELNADKLINGILVQLPLPKQIDPDAVIEAINPEKDVDGFHPVNVGKLLL-GHD-TFIPCTPHGVIHLLKRTGVETKGAKVVIVGRSNIVGKPLSVLMMNKDVNATVTVCHSGTKNLTEVTKEADILVAAMGKPRFIKADMIKKGAVVIDVGVNRIDDSTKKSGFR 246          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ANADF (Bifunctional protein folD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=folD PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.869e-60
Identity = 129/235 (54.89%), Postives = 157/235 (66.81%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            IIDGK +A  +R E+AE VR L    G  PGL+VV VG    S  YV  KRK C EVGI+S +  LP  VS+A+L++ V  LNA P VHGILVQLPLPKH++E  VL  I   KD DGFHP N+G L++ G      PCTP G + LL  + V  KGKRA+VVGRSNIVG P++ +LL+  ATVTI HS T D    V  ADIV+AA G+A +I+G WI+ GA VIDVG N +DD
Sbjct:    2 IIDGKLIAAKVRGEVAEAVRALKAS-GVAPGLSVVRVGDDPASAIYVRGKRKDCEEVGIRSDEHHLPATVSQADLLALVARLNADPTVHGILVQLPLPKHLDERAVLDAIDPRKDSDGFHPFNVGALSI-GIPGTPRPCTPAGVMRLLDEARVDPKGKRAIVVGRSNIVGKPMAAMLLERHATVTIAHSRTQDLAGEVARADIVVAAIGKAELIRGEWIREGAVVIDVGMNRLDD 234          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_RHORT (Bifunctional protein folD OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.188e-60
Identity = 124/235 (52.77%), Postives = 158/235 (67.23%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAM--KGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTN 756
            A +IDGKA+AQ +R  IA+EV  L    G VPGLAVV+VG    SQ YV  K K    VG+ S    L    SEAE+++KV  LNA P + GILVQLPLP HI+E+K+L  I  +KDVDGFHP+N+G+L++     +   +PCTPKGCL LLK     + GK A+V+GRSNIVG P++ LLL A+ TVT+ HS + D   + R  DIV+AA G+  M+KG W+KPGA VIDVG N
Sbjct:    3 AHLIDGKAIAQQLRERIAQEVADLKAHRGLVPGLAVVLVGEDAASQVYVGSKEKMAVAVGMHSVVCRLAATTSEAEVLAKVEALNADPTIDGILVQLPLPAHIDEDKILLAIDPDKDVDGFHPVNVGRLSIGQSNGEHGMVPCTPKGCLMLLKGVLGDLTGKTALVIGRSNIVGKPMAQLLLSANCTVTLAHSRSRDLPDLCRRMDIVVAAVGRPEMVKGDWLKPGAVVIDVGMN 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD1_ROSDO (Bifunctional protein folD 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD1 PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.188e-60
Identity = 125/243 (51.44%), Postives = 158/243 (65.02%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            AT+IDGKA A  +R+++AE V  L   +G  PGLAVV+VG    SQ YV  K K   EVG+KS +  L    SE +L++ V +LN  PD+HGILVQLPLP H++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVVVGRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIKPGA VIDVG N +D   K  G
Sbjct:    3 ATLIDGKAFAARVRAQVAEHVTRLKADHGITPGLAVVLVGQDPASQVYVRSKGKQTTEVGMKSVEHKLDADTSETDLLAVVDQLNKDPDIHGILVQLPLPGHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLLGMDAVVVGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAVGRPEMVPGDWIKPGATVIDVGINRLDAPEKGEG 243          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LACS1 (Bifunctional protein folD OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=folD PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.438e-60
Identity = 124/237 (52.32%), Postives = 161/237 (67.93%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            ATI+DG+ +++ IR+ ++E+V LL ++ G  P L V++VG    SQ YV  KRK    +GI++ DI LPE V E ELI  + ELN+   VHGILVQLPLPKHINE KV   I  EKDVDGFHPLNIGKL M    P  LPCTP+G +E  K   + + GKR V+VGRSNIVG P++ LL+ +DATVTI HS T +   + ++ADI+I A G+   I  +++K GA VIDVG N  +D
Sbjct:    3 ATILDGRMLSKKIRTNVSEKVSLLKQE-GITPKLVVILVGEDPASQVYVRNKRKTAHALGIEAVDIRLPENVEEDELIRLIDELNSDGTVHGILVQLPLPKHINENKVTHRIIPEKDVDGFHPLNIGKLFMNIPGP--LPCTPRGIMEFFKEYDIPVSGKRVVIVGRSNIVGRPMAALLVNSDATVTIAHSKTKNLAEVTKQADILIVAIGKGEFIDENYVKKGAVVIDVGMNRNND 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: C1TC_SCHPO (C-1-tetrahydrofolate synthase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPBC839.16 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.438e-60
Identity = 117/247 (47.37%), Postives = 163/247 (65.99%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLS--EKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            A +++G ++A+ +R E+ E++  +   + Y  V  L ++ VGGR+DS  YV MK +A  E GI    ++ PE ++E +L+  +   N  P VHGI+VQLPLP HINE+ +   ++ EKDVDGF   N+GKL  +   PLF  CTPKG + +LK  G+ ++GK AVV+GRSNIVG P+S+LL KA+ATVT+ HS T     IVR ADIV+AA G    +K  W+K G   IDVG N++ D+TKKSGYR
Sbjct:    2 ALLLEGTSLARKVREELREQISSIKSVDPYFNV-SLKIIQVGGREDSNVYVRMKTRAANEAGISCEHVNFPEDITEYDLLLAIKGFNEDPTVHGIIVQLPLPAHINEQIITEAVAPEKDVDGFCETNLGKLTKREGQPLFTACTPKGIMCILKHYGINVQGKHAVVIGRSNIVGRPMSILLEKANATVTLCHSKTESIADIVRTADIVVAAIGIPHFVKADWLKKGVVAIDVGINSIPDATKKSGYR 247          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_GEOKA4.919e-6153.59Bifunctional protein folD OS=Geobacillus kaustophi... [more]
FOLD_CHLT31.096e-6048.99Bifunctional protein folD OS=Chloroherpeton thalas... [more]
FOLD2_ROSDO1.096e-6050.21Bifunctional protein folD 2 OS=Roseobacter denitri... [more]
FOLD_BREBN1.431e-6054.24Bifunctional protein folD OS=Brevibacillus brevis ... [more]
FOLD_TREDE1.869e-6051.42Bifunctional protein folD OS=Treponema denticola G... [more]
FOLD_ANADF1.869e-6054.89Bifunctional protein folD OS=Anaeromyxobacter sp. ... [more]
FOLD_RHORT3.188e-6052.77Bifunctional protein folD OS=Rhodospirillum rubrum... [more]
FOLD1_ROSDO3.188e-6051.44Bifunctional protein folD 1 OS=Roseobacter denitri... [more]
FOLD_LACS15.438e-6052.32Bifunctional protein folD OS=Lactobacillus salivar... [more]
C1TC_SCHPO5.438e-6047.37C-1-tetrahydrofolate synthase, cytoplasmic OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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