CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHESH (Bifunctional protein folD OS=Shewanella sediminis (strain HAW-EB3) GN=folD PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.853e-59
Identity = 120/236 (50.85%), Postives = 155/236 (65.68%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            IDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DL    SEAEL++ + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +G+   G  AV+VG SNIVG P+SL LL A  T T  H  T + E  VR+AD+++ A G+   I G WIKPGA VIDVG N ++D +
Sbjct:    6 IDGKAIAQSIRTQLKEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSRSYDLDTTTSEAELLTLIDECNEDPAIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKTTGIDTYGLDAVIVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEQKVRQADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLEDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_HALOH (Bifunctional protein folD OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=folD PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.026e-58
Identity = 125/234 (53.42%), Postives = 159/234 (67.95%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IIDGK +A  IR+E+ EEV+  +E+ G+ PGL+VV+VG    S++YV MK K   E+GI S    L  Q ++ EL+  V +LN    + GILVQLPLP HI+E+ V+  IS  KDVDGFHP+N GKL        F  CTP G +ELL R G+ I GK+AVVVGRSNIVG PV+ LLL+  ATVT+ HSHT D     R+ADI++ AAG+  ++KG  +K GAAVIDVGTN VD
Sbjct:    4 IIDGKKIASEIRNELKEEVKKFTEE-GRPPGLSVVLVGDDPASRTYVRMKEKVAKEIGIYSKVDYLSRQTTQDELLDIVDKLNNDEKIDGILVQLPLPDHIDEKAVIEAISPFKDVDGFHPINTGKLFSGMTGQRFEACTPLGIIELLDREGIEIDGKKAVVVGRSNIVGKPVAHLLLERHATVTVCHSHTADLGIETRQADILVVAAGRPKLVKGEMVKEGAAVIDVGTNRVD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BACV8 (Bifunctional protein folD OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=folD PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.026e-58
Identity = 121/247 (48.99%), Postives = 166/247 (67.21%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            +IDGKA+++ ++ EIA EV  +  K GK P LA ++VG    S++YV+ K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +  +GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     +EADI+IAA GQ   +K   +K GA VIDVGT  V D+TKKSG++
Sbjct:    3 LIDGKAISELVKQEIAAEVAGIVAKGGKRPHLAAILVGHDGGSETYVAAKVKACEVCGFKSSLIRYEADVTEEELLAKVRELNEDADVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYHIETQGKKCVVLGRSNIVGKPMASLMMQKAYPGDATVTVCHSRSKDLVKECQEADIIIAALGQPNFVKAEMVKEGAVVIDVGTTRVPDATKKSGFK 247          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BACFR (Bifunctional protein folD OS=Bacteroides fragilis GN=folD PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.026e-58
Identity = 121/248 (48.79%), Postives = 165/248 (66.53%), Query Frame = 1
Query:   61 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            T+IDGKA+++ ++ EIA EV  +    GK P LA ++VG    S++YV+ K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     READI+IAA GQ   +K   +K GA VIDVGT  V D++KKSG++
Sbjct:    2 TLIDGKAISEQVKQEIAAEVAEIVAHGGKRPHLAAILVGHDGGSETYVAAKVKACEVCGFKSSLIRYESDVTEDELLAKVRELNEDDDVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYRIETSGKKCVVLGRSNIVGKPMAALMMQKAYPGDATVTVCHSRSKDLVKECREADIIIAALGQPNFVKAEMVKEGAVVIDVGTTRVPDASKKSGFK 247          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BACFN (Bifunctional protein folD OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=folD PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.026e-58
Identity = 121/248 (48.79%), Postives = 165/248 (66.53%), Query Frame = 1
Query:   61 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            T+IDGKA+++ ++ EIA EV  +    GK P LA ++VG    S++YV+ K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     READI+IAA GQ   +K   +K GA VIDVGT  V D++KKSG++
Sbjct:    2 TLIDGKAISEQVKQEIAAEVAEIVAHGGKRPHLAAILVGHDGGSETYVAAKVKACEVCGFKSSLIRYESDVTEDELLAKVRELNEDDDVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYRIETSGKKCVVLGRSNIVGKPMAALMMQKAYPGDATVTVCHSRSKDLVKECREADIIIAALGQPNFVKAEMVKEGAVVIDVGTTRVPDASKKSGFK 247          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEWM (Bifunctional protein folD OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=folD PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.339e-58
Identity = 121/239 (50.63%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A  IDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DL    +E +L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  A+VVG SNIVG P+SL LL A  T T  H  T + E  VR+AD+V+ A G+   I G WIKPGA VIDVG N ++D +
Sbjct:    3 AQTIDGKAIAQSIRTQLKEKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSRSYDLESSTTEEQLLSLIDECNQDPAIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDALVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEQKVRQADLVVVAVGKPGFIPGEWIKPGALVIDVGINRLEDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CHLCH (Bifunctional protein folD OS=Chlorobium chlorochromatii (strain CaD3) GN=folD PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.339e-58
Identity = 121/247 (48.99%), Postives = 161/247 (65.18%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            +IDGK V+  +++E+ E V  L+ K GKVPGL V+IVG    SQ YV  K K+C E+G+ S  I+LP   ++  L+  +++LN    VHGILVQ P+PK I+E  +   I   KDVDGFHP N+G+L M   D  F+ CTP G LELL R  +  KGK  VVVGRSNIVG P++ L+L    +++ TVTI HS TP+     ++ADI+IAA G+A  I    +K GA VIDVG N VDD++ K+GYR
Sbjct:    3 VIDGKKVSLELKNELRERVEALNAKCGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTQEHLLKIINDLNNDDTVHGILVQQPMPKQIDEFTITLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATPNITEFTKQADILIAAIGKANFITADMVKAGAVVIDVGINRVDDASAKNGYR 249          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD1_THICR (Bifunctional protein folD 1 OS=Thiomicrospira crunogena (strain XCL-2) GN=folD1 PE=3 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.339e-58
Identity = 117/239 (48.95%), Postives = 156/239 (65.27%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A I+DGKA+A  +R  I +EV        K PGLAV++VG    SQ YV  K+ AC + G     + LP + S+AEL++K+ ELN   DVHGI+VQLP+P HI+ E+++  I  +KDVDGFHP N+G+LA   R P   PCTP G + +L ++G+ ++G  AVVVG SNIVG+P++L LL   ATVT+ HS T D    V EAD+V+   G   M+KG WIK GA VIDVG N +DD +
Sbjct:    3 AQILDGKAIALELRDSIQKEVEAQVANGKKPPGLAVILVGEDPASQVYVKNKKIACEKAGFNDVSMVLPAETSQAELLAKIDELNTRDDVHGIIVQLPVPDHIDPEEIIERIDPKKDVDGFHPYNMGRLAT--RLPELAPCTPHGVMTMLAKTGIPLRGLNAVVVGASNIVGVPMALELLNERATVTVCHSATKDLPQKVAEADLVVVGVGIPNMVKGDWIKDGAIVIDVGINRLDDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_DICNV (Bifunctional protein folD OS=Dichelobacter nodosus (strain VCS1703A) GN=folD PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.749e-58
Identity = 128/246 (52.03%), Postives = 160/246 (65.04%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTN--AVDDSTKKSG 786
            A II+GK +A  IR EI +E        G  PGLAV++VG    S+ YV  K     EVG  S    LP Q ++AEL++K+  LN  P + GILVQLPLP H+N E VL  I   KDVDGFHPLNIG+L     +P  +PCTP GC  +LKR  G ++ GK+A+++GRSNIVG P++ LLL+  ATVTI HS TPD  ++ R+ADIVIAA GQ  ++KG WIK GA V+DVG N  AV D TK  G
Sbjct:    3 AEIINGKEIAAEIRREIKQETAQFIAATGVRPGLAVILVGNDPASEVYVRNKGIQAEEVGFLSQIYRLPAQTTQAELLAKIVALNNDPQICGILVQLPLPAHLNAEIVLNTIDPNKDVDGFHPLNIGRL--WAGEPCSVPCTPLGCSLILKRYFGDSLAGKKALIIGRSNIVGKPMAALLLQQHATVTIAHSKTPDVPALCRQADIVIAAVGQPELVKGDWIKSGAVVLDVGINRIAVGDKTKLVG 246          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CHLL2 (Bifunctional protein folD OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=folD PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.749e-58
Identity = 131/247 (53.04%), Postives = 157/247 (63.56%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPV-SLLLLKADA---TVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            IIDGK V+  ++SE+   V       GKVPGL V+IVG    SQ YV  K K+C E G+ S  I++    SE  L+S++ ELN  PDVHGILVQ PLPK I+E  V   I   KDVDGFHP N+G+L M   D  F+ CTP G LELL R  +  KGK  VVVGRSNIVG P+ +L+L K DA   TVTI HS T D  S  R+ADI+IAA G+A  I    +KPGA VIDVG N +DD + KSG R
Sbjct:    3 IIDGKKVSIDLKSELKVRVDEHRAATGKVPGLTVIIVGEDPASQVYVRNKAKSCKETGMHSSVIEMDASTSEEALLSRIRELNDDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLDATNCTVTICHSATKDIPSYTRQADILIAAIGKAGFITADMVKPGAVVIDVGINRIDDPSTKSGSR 249          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SHESH7.853e-5950.85Bifunctional protein folD OS=Shewanella sediminis ... [more]
FOLD_HALOH1.026e-5853.42Bifunctional protein folD OS=Halothermothrix oreni... [more]
FOLD_BACV81.026e-5848.99Bifunctional protein folD OS=Bacteroides vulgatus ... [more]
FOLD_BACFR1.026e-5848.79Bifunctional protein folD OS=Bacteroides fragilis ... [more]
FOLD_BACFN1.026e-5848.79Bifunctional protein folD OS=Bacteroides fragilis ... [more]
FOLD_SHEWM1.339e-5850.63Bifunctional protein folD OS=Shewanella woodyi (st... [more]
FOLD_CHLCH1.339e-5848.99Bifunctional protein folD OS=Chlorobium chlorochro... [more]
FOLD1_THICR1.339e-5848.95Bifunctional protein folD 1 OS=Thiomicrospira crun... [more]
FOLD_DICNV1.749e-5852.03Bifunctional protein folD OS=Dichelobacter nodosus... [more]
FOLD_CHLL21.749e-5853.04Bifunctional protein folD OS=Chlorobium limicola (... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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