CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:1..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD2_MYXXD (Bifunctional protein folD 2 OS=Myxococcus xanthus (strain DK 1622) GN=folD2 PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 123/237 (51.90%), Postives = 162/237 (68.35%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A +IDGKAVA  +R+E+  EV  L  ++G  PGLAVV VG    S+ YV+ K+KA  EVG +S+++   E +++A L+  +H+LNA P VHGILVQLPLP+HI+ + ++  +  EKDVDGFHPLN G L + GR      CTP G + LL+  G    GKRAVVVGRSNIVG P++L+LL+ +ATVTI HS + D    V  ADI++ A G A ++KG+WIKPGA VIDVG N   D
Sbjct:    3 AQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEEVGFRSWELHPDEGITQAALLEVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLL-GRSTT-RACTPYGVMRLLEEIGCDPAGKRAVVVGRSNIVGKPMALMLLQKNATVTICHSKS-DLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMNRKPD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS1 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=folD PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.984e-58
Identity = 125/242 (51.65%), Postives = 157/242 (64.88%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV--DDSTKKSG 786
            IDGKA A  +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP + SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVTI HS T D  ++ R ADI++AA G+  MI G ++KPGA VIDVG N +  D  TK  G
Sbjct:    6 IDGKAFAAGVRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMASFEHRLPAETSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATVIDVGINRIERDGKTKLVG 245          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CYTH3 (Bifunctional protein folD OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=folD PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.984e-58
Identity = 113/247 (45.75%), Postives = 169/247 (68.42%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            ++DGK  +  I+ E+  +V  +  K GK+P LA V+VG    + +YV+ K KAC  VG KS  + LPE ++EA+L++KV E+NA  D+ G +VQLPLPKHI+E+KV   IS +KDVDGFHP ++G++ +    P +LP TP G ++LL+R+G+   GK  VV+GRS+IVG P+S+L+ +     +ATVT+VHS T + + +  +ADI+I A G+   +    +K GA V+DVG + +DD+TKKSG+R
Sbjct:    3 LLDGKITSDQIKEELKTKVEAIKAKGGKIPHLAAVLVGDSGAAVTYVNAKVKACELVGFKSTLVKLPETITEADLLAKVAEINADKDIDGYIVQLPLPKHIDEQKVTEAISPDKDVDGFHPTSLGRMVL--NLPTYLPATPYGIMQLLERNGIETSGKHCVVMGRSHIVGSPMSILMARNTNPGNATVTMVHSRTKNLKELTLQADILIVAIGKPEFVTADMVKEGAVVVDVGIHRIDDATKKSGFR 247          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BACTN (Bifunctional protein folD OS=Bacteroides thetaiotaomicron GN=folD PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.984e-58
Identity = 120/248 (48.39%), Postives = 166/248 (66.94%), Query Frame = 1
Query:   61 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            T+IDGKA+++ ++ EIA EV  +  + GK P LA ++VG    S++YV+ K KAC   G KS  I     V+E EL++KV ELN   DV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P ++  TP G LELLKR  +   GK+ VV+GRSNIVG P++ L+++     DATVT+ HS + D     +EADI+IAA GQ   +K   +K GA VIDVGT  V D++KKSG++
Sbjct:    2 TLIDGKAISEQVKQEIAAEVAEIVARGGKRPHLAAILVGHDGGSETYVAAKVKACEVCGFKSSLIRYESDVTEEELLAKVRELNNDDDVDGFIVQLPLPKHISEQKVIETIDYRKDVDGFHPINVGRMSI--GLPCYVSATPNGILELLKRYEIETSGKKCVVLGRSNIVGKPMASLMMQKAYPGDATVTVCHSRSKDLVKECQEADIIIAALGQPNFVKEEMVKEGAVVIDVGTTRVPDASKKSGFK 247          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD2_PARDP (Bifunctional protein folD 2 OS=Paracoccus denitrificans (strain Pd 1222) GN=folD2 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.984e-58
Identity = 121/237 (51.05%), Postives = 155/237 (65.40%), Query Frame = 1
Query:   61 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDS 771
            TIIDGKA A  +R  +A  V  L   +G VPGLAVV+VG    SQ YV  K     E G+ SF+  LP + ++AEL++ +  LNA P VHGILVQLPLP+H++ E V+  I  +KDVDGFH LN+G L    +    +PCTP GCL LL+ +   + G  AVVVGRSNIVG P++ LLL    TVTI HS T D   + R ADI++AA G+  MI+G WIKPGA VIDVG N ++++
Sbjct:    8 TIIDGKAFASGVRGRVASAVAGLEAAHGVVPGLAVVLVGEDPASQVYVRNKGIQTREAGMASFEHKLPAETAQAELMALIERLNADPAVHGILVQLPLPRHMDAEAVINAIDPKKDVDGFHVLNVGLLGTGQK--AMVPCTPLGCLMLLRDTLGDLSGLNAVVVGRSNIVGKPMAQLLLNESCTVTIAHSRTRDLAGLCRTADILVAAVGRPRMIRGDWIKPGATVIDVGINRIEEA 242          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD2_COLP3 (Bifunctional protein folD 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=folD2 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.984e-58
Identity = 120/238 (50.42%), Postives = 155/238 (65.13%), Query Frame = 1
Query:   55 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            +A++IDGKA+A+ +R  + EEV L      +VPGLAV++VG    SQ YV  KRKAC EVG  S   DLP   SE EL++ V ELN    + GILVQLPLPK++N + ++  I+  KDVDGFHP N+GKL +  R P   PCTPKG + L++ +G+  KG  A+V+G SNIVG P+ L LL A  TVT  H  T D E  VR AD+++ A G+   I G WIK GA VIDVG N +D+
Sbjct:    2 RASLIDGKAIAKKLRDSVKEEVNLRISNGQRVPGLAVILVGCDPASQVYVGSKRKACEEVGFISRSYDLPHTTSEQELLALVSELNNDDSIDGILVQLPLPKNLNADLIIEHINPLKDVDGFHPSNVGKLVL--RQPGLRPCTPKGIVTLIESTGIDPKGLDALVIGASNIVGRPMGLELLLAKCTVTTTHRFTKDLEGKVRNADLLVVAVGKPGFIPGEWIKEGAIVIDVGINRLDN 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_MANSM (Bifunctional protein folD OS=Mannheimia succiniciproducens (strain MBEL55E) GN=folD PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.897e-58
Identity = 113/237 (47.68%), Postives = 158/237 (66.67%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A +I G A+A+ +++E+ +++     +  + PGLAV++VG    SQ YV  KRK+CAE+GI S   DL E  SEA L++ + ELN   D+ GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ + + +KG+ AV+VG SNIVG P+++ LL A  TVT+ H  T + E  VR+ADI++ A G+A  I G+W+K GA VIDVG N  +D
Sbjct:    3 AQVISGSALAKKVKTEVGQKIEQYVAQGKRAPGLAVILVGADPASQVYVGSKRKSCAEIGINSKSYDLEESTSEAALLTLIDELNNDADIDGILVQLPLPKHIDSTKVIERIAPHKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTELNLKGRHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTTNLEGYVRQADILVVAVGKAEFIPGNWVKEGAVVIDVGINRCED 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BURCC (Bifunctional protein folD OS=Burkholderia cenocepacia (strain MC0-3) GN=folD PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.090e-58
Identity = 121/243 (49.79%), Postives = 164/243 (67.49%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDG A+++T+R++ AE    L+ + G  PGLAV++VG    S+ YV  K KAC + G  S     P  +SEA+L++++HELN  P +HGILVQLPLP HI+  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++ +  G+ ++G  AVV+GRSNIVG P++++LL A ATVTI HS T D  +  READIV+AA G+  ++    +KPGA VIDVG N  DD+ K  G
Sbjct:    3 ALLIDGNALSKTLRAQAAERAAALTAR-GHQPGLAVILVGANPASEVYVRNKIKACEDNGFFSLKDAYPATLSEADLLARIHELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGAL-MTGK-PLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGKRNILTADMVKPGATVIDVGMNR-DDAGKLCG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD1_PARDP (Bifunctional protein folD 1 OS=Paracoccus denitrificans (strain Pd 1222) GN=folD1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.090e-58
Identity = 121/238 (50.84%), Postives = 155/238 (65.13%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDS 771
            A IIDGKA A  +R  +A  V  L   +G VPGLAVV+VG    SQ YV  K     E G+ SF+  LP + ++AEL++ +  LNA P VHGILVQLPLP+H++ E V+  I  +KDVDGFH LN+G L    +    +PCTP GCL LL+ +   + G  AVVVGRSNIVG P++ LLL    TVTI HS T D   + R ADI++AA G+  MI+G WIKPGA VIDVG N ++++
Sbjct:    3 ARIIDGKAFASGVRGRVASAVAGLEAAHGVVPGLAVVLVGEDPASQVYVRNKGIQTREAGMASFEHKLPAETAQAELMALIERLNADPAVHGILVQLPLPRHMDAEAVINAIDPKKDVDGFHVLNVGLLGTGQK--AMVPCTPLGCLMLLRDTLGDLSGLNAVVVGRSNIVGKPMAQLLLNESCTVTIAHSRTRDLAGLCRTADILVAAVGRPRMIRGDWIKPGATVIDVGINRIEEA 238          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_TOLAT (Bifunctional protein folD OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/237 (50.21%), Postives = 153/237 (64.56%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGKA+A ++R  +A  V     K  + PGLAVV+VG    SQ YV  KR+AC EVG  S   DL   +++ EL++ + +LNA P + G+LVQLPLP H++  +V+  I   KDVDGFHP N+G+LA   R P   PCTPKG + LL+ +GV IKG  AVVVG SNIVG P++L LL A  T T  H  T   E  VR+ADI++ A G+A  I G WIKPGA V+DVG N + +
Sbjct:    3 AKIIDGKAIALSVRQRVAARVAERKAKGLRAPGLAVVLVGEDAASQVYVGSKRRACEEVGFISKSYDLAPTITQDELLALIDQLNADPTIDGVLVQLPLPAHLDSTQVIERILPNKDVDGFHPYNVGRLAQ--RIPALRPCTPKGMMTLLENTGVKIKGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKGLEQFVRQADILVVAVGKAEFIPGEWIKPGAIVLDVGINRLSN 237          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD2_MYXXD2.285e-5851.90Bifunctional protein folD 2 OS=Myxococcus xanthus ... [more]
FOLD_RHOS12.984e-5851.65Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD_CYTH32.984e-5845.75Bifunctional protein folD OS=Cytophaga hutchinsoni... [more]
FOLD_BACTN2.984e-5848.39Bifunctional protein folD OS=Bacteroides thetaiota... [more]
FOLD2_PARDP2.984e-5851.05Bifunctional protein folD 2 OS=Paracoccus denitrif... [more]
FOLD2_COLP32.984e-5850.42Bifunctional protein folD 2 OS=Colwellia psychrery... [more]
FOLD_MANSM3.897e-5847.68Bifunctional protein folD OS=Mannheimia succinicip... [more]
FOLD_BURCC5.090e-5849.79Bifunctional protein folD OS=Burkholderia cenocepa... [more]
FOLD1_PARDP5.090e-5850.84Bifunctional protein folD 1 OS=Paracoccus denitrif... [more]
FOLD_TOLAT6.648e-5850.21Bifunctional protein folD OS=Tolumonas auensis (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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