CK932957

Overview
NameCK932957
Unique NameCK932957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24
Identity = 56/116 (48.28%), Postives = 80/116 (68.97%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            + A +DW E+P AH+FK D+PG  +E +KV++EDGNIL+I GE + + EE N K   WH  ER +   G F+R   LPEN K+++IKA ++NGVL+V VPK    KK  V++I+I+
Sbjct:   48 TNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDK---WHRVERSS---GKFTRRFRLPENAKMEEIKASMENGVLSVTVPK-VPEKKPEVKSIDIS 156          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24
Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            + A +DW E+P +H+FK D+PG  +E +KV++E+GN+L I G+ +K+KE+ N K   WH  ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK A  KK  V+ I I+
Sbjct:   40 ANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDK---WHRVERSS---GQFMRRFRLPENAKVDQVKASMENGVLTVTVPK-AEVKKPEVKAIEIS 148          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24
Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            + A +DW E+P +H+FK D+PG  +E +KV++E+GN+L I G+ +K+KE+ N K   WH  ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK A  KK  V+ I I+
Sbjct:   41 ANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDK---WHRVERSS---GQFMRRFRLPENAKVDQVKAGMENGVLTVTVPK-AEVKKPEVKAIEIS 149          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24
Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            + A +DW E+P +H+FK D+PG  +E +KV++E+GN+L I G+ +K+KE+ N K   WH  ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK A  KK  V+ I I+
Sbjct:   41 ANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDK---WHRVERSS---GQFMRRFRLPENAKVDQVKAGLENGVLTVTVPK-AEVKKPEVKAIEIS 149          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.241e-24
Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 3
Query:  180 FFGYPFRRFFMSPPVFREWSGSTAL-MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            F  +PF    +S    RE S   +  +DW E+P AH+FK D+PG  +E +KV+IED  +L+I GE + +KE+ N +   WH  ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK+   KK  V+ I+I+
Sbjct:   27 FKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQ---WHRLERSS---GKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKE-EVKKPEVKTIDIS 157          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.241e-24
Identity = 56/114 (49.12%), Postives = 79/114 (69.30%), Query Frame = 3
Query:  249 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            A +DW E+P AH+FK D+PG  +E +KV+IE+ ++L+I GE   +KE+   K   WH  ER +   G F+R   LPENVK+DQ+KA ++NGVLTV VPK A  KK+ V++I I+
Sbjct:   46 ARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKED---KNDTWHRVERSS---GQFTRRFRLPENVKMDQVKAAMENGVLTVTVPK-AETKKADVKSIQIS 152          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23
Identity = 60/140 (42.86%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  180 FFGYPFRRFFMSPPVFREWSGS--TALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINITS 593
            F  +PF    +S   F + + +  +  +DW E+P AH+FK D+PG  +E +KV+IED  +L+I GE   +KE+ N +   WH  ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK+   KK  V++I I+S
Sbjct:   11 FKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQ---WHRVERSS---GKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKE-EIKKPEVKSIEISS 143          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23
Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  249 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            A +DW E+P  H+FK DVPG  +E +KV+++DGNIL+I GE ++++EE + K   WH  ER +   G F R   LPEN K +QIKA ++NGVLTV VPK+   KK  V++I I+
Sbjct:   52 ARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDK---WHRVERSS---GKFLRRFRLPENTKPEQIKASMENGVLTVTVPKE-EPKKPDVKSIQIS 158          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23
Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 3
Query:  249 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            A +DW E+P AH+FK DVPG  +E +KV+++DGNIL+I GE  K++EE   K   WH  ER +   G F R   LP+N K +QIKA ++NGVLTV VPK+   KK  V++I I+
Sbjct:   54 ARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEE---KTDQWHRVERSS---GKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKE-EAKKPDVKSIQIS 160          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23
Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            + A +DW E+P AH+FK DVPG  +E +KV++EDGNIL+I GE + + EE   K   WH  ER +   G F R   LPEN K++++KA ++NGVL+V VPK     K  V++++I+
Sbjct:   47 TNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEE---KSDTWHRVERSS---GKFMRRFRLPENAKVEEVKASMENGVLSVTVPK-VQESKPEVKSVDIS 155          
The following BLAST results are available for this feature:
BLAST of CK932957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HS17C_ARATH3.176e-2448.2817.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HS16C_ORYSJ3.176e-2448.2816.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS16B_ORYSJ4.148e-2448.2816.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ4.148e-2448.2816.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HSP12_MEDSA9.241e-2444.2018.2 kDa class I heat shock protein OS=Medicago sa... [more]
HS17B_ARATH9.241e-2449.1217.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_MEDSA1.207e-2342.8618.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS177_ORYSJ1.576e-2349.1217.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS17A_ORYSJ2.689e-2350.0017.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP17_ARATH3.512e-2345.6917.4 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932957 ID=CK932957; Name=CK932957; organism=Citrus sinensis; type=EST; length=730bp
GGGGCTTTCTGAGAACTATTATCATACACAGCAGAGGATGAGGCTTGTAG
AATATTCTGGACATTCAACGATTACTCGAACTCCGCTCTTATAAGCCAAC
CAAACAAAACCTCGCACTCCTCCATCCCCTTTACGCCACAATCCAAAATC
AAGATTACAATCAAACAACGGCTGGTGACTTTTTTGGGTACCCTTTCAGG
CGCTTTTTCATGAGCCCTCCTGTCTTCCGTGAATGGTCCGGATCGACAGC
CCTGATGGATTGGCTCGAATCCCCAAGTGCCCACATATTCAAGATCGACG
TCCCAGGATATAGCAGGGAGAACATAAAGGTACAGATTGAAGACGGGAAC
ATATTGCGCATAATAGGAGAGGGTGCTAAAGATAAAGAGGAGGCAAATAC
AAAAGAGACAGTTTGGCATGTAGCAGAAAGGCGTGCTGGCGGAAGAGGAG
ACTTTTCTCGGGAAATTGAATTGCCCGAAAATGTGAAGTTGGATCAAATC
AAGGCCCATGTGGATAATGGGGTTCTTACCGTTATTGTGCCCAAAGATGC
CAATCACAAGAAGAGTAGTGTTAGGAATATCAACATCACTAGCAAGCTCT
AGTTGAGTAGATTCTATGAAATTATTAGGCTCCCTCTTCTCAGCTGTCCA
ATTTCCAAAATGGGCTTCTGATGTAAGAATAAATAATAATAATAACAATC
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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