CK932957

Overview
NameCK932957
Unique NameCK932957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932957_ssr682 microsatellite CK932957_ssr682:682..693. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1506 contig Csv1_Contig1506:1..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.586e-23
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 3
Query:  177 DFFGYPFRRFFMSPPVFREWSGSTAL-----MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            D +  PF  F    P        TA      MDW E+P AH+FK D+PG  +E +KV++EDGN+L + GE  K+KE+ N K   WH  ER +   G F R   L E+ K++++KA ++NGVLTV VPK A  KK  V+ I I+
Sbjct:   15 DLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDK---WHRVERSS---GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPK-AEVKKPEVKAIQIS 150          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23
Identity = 60/138 (43.48%), Postives = 84/138 (60.87%), Query Frame = 3
Query:  192 PFRRFFMSPPVFREWSGSTAL-----MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            PF+ F +      E+   TA      +DW E+P AH+FK D+PG  +E +KV++E+G +L+I GE  K+KEE N K   WH  ER +   G F R   LPEN K+D++KA + NGV+TV VPK    KK  V+ I+I+
Sbjct:   26 PFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDK---WHRVERSS---GKFLRRFRLPENAKVDEVKAAMANGVVTVTVPK-VEIKKPEVKAIDIS 156          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22
Identity = 52/112 (46.43%), Postives = 77/112 (68.75%), Query Frame = 3
Query:  255 MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            +DW E+P AH+FK D+PG  +E +KV++ED  +L+I GE + +KE+ N +   WH  ER +   G F R   LPEN K+D++KA ++NGVLTV VPK+   KK+ V++I I+
Sbjct:   53 VDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDE---WHRVERSS---GKFLRRFRLPENAKMDKVKASMENGVLTVTVPKE-EIKKAEVKSIEIS 157          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.276e-22
Identity = 62/141 (43.97%), Postives = 83/141 (58.87%), Query Frame = 3
Query:  180 FFGYPFRRFFMS---PPVFREWSGSTAL-MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            F  +PF     S   P   RE S   +  +DW E+P AH+FK D+PG  +E +KVQIED  +L+I GE   +KE+   K   WH  ER +   G F R   LPEN K++Q+KA ++NGVLTV VPK+   KK  V+ I I+
Sbjct:   27 FKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKED---KNDTWHRVERSS---GKFMRRFRLPENAKVEQVKASMENGVLTVTVPKE-EVKKPDVKAIEIS 160          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.276e-22
Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 3
Query:  255 MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            +DW E+P AH+FK D+PG  +E +KV++E+G +L+I GE  K+KEE N K   WH  E  +   G F R   LPEN  +D++KA ++NGVLTV VPK    KK  V++I+I+
Sbjct:   54 IDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNK---WHRVEFSS---GKFLRRFRLPENANVDEVKAGMENGVLTVTVPK-VEMKKPEVKSIHIS 158          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22
Identity = 52/112 (46.43%), Postives = 75/112 (66.96%), Query Frame = 3
Query:  255 MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            +DW E+P  H+FK+D+PG  +E +KV++E+  +L+I GE   +KE+ N K   WH  ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK+   KK  V++I I+
Sbjct:   49 IDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDK---WHRMERSS---GKFMRRFRLPENAKMDQVKASMENGVLTVTVPKE-EVKKPEVKSIEIS 153          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  192 PFRRFFMSPPVFREWSGST-ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            PF+ F     +  E S      +DW E+P AH+F+ D+PG  +E +KVQIED  +L+I GE   +KE+   K   WH  ER +   G+F R   LPEN K++Q+KA ++NGVLTV VPK+   KK  V+ I I+
Sbjct:   26 PFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKED---KNDTWHRVERSS---GNFMRRFRLPENAKVEQVKASMENGVLTVTVPKE-EVKKPDVKAIEIS 152          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 3
Query:  255 MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            +DW E+P AH+FK D+PG  +E +KVQIED  +L+I GE   +KE+   K   WH  ER +   G F+R   LPEN K++++KA ++NGVLTV VPK+   KK  V+ I I+
Sbjct:   49 VDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKED---KNDTWHRVERSS---GKFTRRFRLPENAKVNEVKASMENGVLTVTVPKE-EVKKPDVKAIEIS 153          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22
Identity = 57/134 (42.54%), Postives = 82/134 (61.19%), Query Frame = 3
Query:  192 PFRRFFMSPPVFREWSGSTAL-MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            PF+ F     +  E S   +  +DW E+P AH+FK D+PG  +E +K++I+DG +L+I GE   +KE+   K   WH  ER +   G   R   LPEN K+DQ+KA ++NGVLTV VPK+   KK  V+ I+I+
Sbjct:   26 PFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKED---KNDTWHRVERSS---GKLVRRFRLPENAKVDQVKASMENGVLTVTVPKE-EIKKPDVKAIDIS 152          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21
Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 3
Query:  255 MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            +DW E+P AH+FK D+PG   E +KV++E+  +L+I GE   +KE+ N K   W   ER +   G F R   LPEN K+DQ+KA ++NGVLTV VPK+   KK  V++I I+
Sbjct:   49 IDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDK---WQRVERSS---GKFMRRFRLPENAKMDQVKASMENGVLTVTVPKE-EMKKPDVKSIEIS 153          
The following BLAST results are available for this feature:
BLAST of CK932957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HS16B_WHEAT4.586e-2342.6616.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HSP11_DAUCA7.823e-2343.4817.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_PEA1.743e-2246.4318.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP16_SOYBN2.276e-2243.9718.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_DAUCA2.276e-2247.3218.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_SOLLC2.973e-2246.4317.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP13_SOYBN3.883e-2243.2817.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN6.623e-2247.3217.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN8.650e-2242.5417.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLPE2.517e-2146.4317.7 kDa class I heat shock protein OS=Solanum per... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932957 ID=CK932957; Name=CK932957; organism=Citrus sinensis; type=EST; length=730bp
GGGGCTTTCTGAGAACTATTATCATACACAGCAGAGGATGAGGCTTGTAG
AATATTCTGGACATTCAACGATTACTCGAACTCCGCTCTTATAAGCCAAC
CAAACAAAACCTCGCACTCCTCCATCCCCTTTACGCCACAATCCAAAATC
AAGATTACAATCAAACAACGGCTGGTGACTTTTTTGGGTACCCTTTCAGG
CGCTTTTTCATGAGCCCTCCTGTCTTCCGTGAATGGTCCGGATCGACAGC
CCTGATGGATTGGCTCGAATCCCCAAGTGCCCACATATTCAAGATCGACG
TCCCAGGATATAGCAGGGAGAACATAAAGGTACAGATTGAAGACGGGAAC
ATATTGCGCATAATAGGAGAGGGTGCTAAAGATAAAGAGGAGGCAAATAC
AAAAGAGACAGTTTGGCATGTAGCAGAAAGGCGTGCTGGCGGAAGAGGAG
ACTTTTCTCGGGAAATTGAATTGCCCGAAAATGTGAAGTTGGATCAAATC
AAGGCCCATGTGGATAATGGGGTTCTTACCGTTATTGTGCCCAAAGATGC
CAATCACAAGAAGAGTAGTGTTAGGAATATCAACATCACTAGCAAGCTCT
AGTTGAGTAGATTCTATGAAATTATTAGGCTCCCTCTTCTCAGCTGTCCA
ATTTCCAAAATGGGCTTCTGATGTAAGAATAAATAATAATAATAACAATC
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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