CK932957

Overview
NameCK932957
Unique NameCK932957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  111 LALLHPLYATIQNQ-DYNQTTAGDFFGYPFRRFFMSPPVFREWSGSTALM----DWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINI 587
            + L  PL+ T+Q+  D ++  AGD   +       + P +     + A+     D  E P++++F+ID+PG    +IKVQ+ED N+L I GE  +D+E+   K   +   ERR    G   R+  LPEN   D I A   +GVL+V V K    +    R I +
Sbjct:    6 MGLESPLFHTLQHMMDMSEDGAGDNKTH-------NAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAK---YLRMERRV---GKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQV 156          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  258 DWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK 545
            D +E P A++F +D+PG   + I+VQIE+ N+L + G+  +D +E    E V  V   R  G+  F R+ +LP+N  L++I A  ++GVL V +PK
Sbjct:   49 DVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKE---NEGVKFVRMERRMGK--FMRKFQLPDNADLEKISAACNDGVLKVTIPK 139          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  258 DWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK 545
            D +E P+A+ F +D+PG   + IKVQ+E+ N+L + GE  ++ +E    E V +V   R  G+  F R+ +LPEN  LD+I A   +GVL V V K
Sbjct:   48 DVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKE---NEGVKYVRMERRMGK--FMRKFQLPENADLDKISAVCHDGVLKVTVQK 138          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 3
Query:  258 DWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK 545
            D  E P++++F +D+PG    +IKVQ+E+ N+L I GE  +++E+   K   +   ERR    G F R+  LPEN   D I A   +GVLTV V K
Sbjct:   49 DVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAK---FIRMERRV---GKFMRKFSLPENANTDAISAVCQDGVLTVTVQK 138          
The following BLAST results are available for this feature:
BLAST of CK932957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HSP21_SOYBN3.084e-1132.3217.9 kDa class II heat shock protein OS=Glycine ma... [more]
HS177_ARATH5.260e-1138.5417.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HS176_ARATH5.260e-1140.6317.6 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP21_SOLPE8.972e-1140.6317.3 kDa class II heat shock protein OS=Solanum pe... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932957 ID=CK932957; Name=CK932957; organism=Citrus sinensis; type=EST; length=730bp
GGGGCTTTCTGAGAACTATTATCATACACAGCAGAGGATGAGGCTTGTAG
AATATTCTGGACATTCAACGATTACTCGAACTCCGCTCTTATAAGCCAAC
CAAACAAAACCTCGCACTCCTCCATCCCCTTTACGCCACAATCCAAAATC
AAGATTACAATCAAACAACGGCTGGTGACTTTTTTGGGTACCCTTTCAGG
CGCTTTTTCATGAGCCCTCCTGTCTTCCGTGAATGGTCCGGATCGACAGC
CCTGATGGATTGGCTCGAATCCCCAAGTGCCCACATATTCAAGATCGACG
TCCCAGGATATAGCAGGGAGAACATAAAGGTACAGATTGAAGACGGGAAC
ATATTGCGCATAATAGGAGAGGGTGCTAAAGATAAAGAGGAGGCAAATAC
AAAAGAGACAGTTTGGCATGTAGCAGAAAGGCGTGCTGGCGGAAGAGGAG
ACTTTTCTCGGGAAATTGAATTGCCCGAAAATGTGAAGTTGGATCAAATC
AAGGCCCATGTGGATAATGGGGTTCTTACCGTTATTGTGCCCAAAGATGC
CAATCACAAGAAGAGTAGTGTTAGGAATATCAACATCACTAGCAAGCTCT
AGTTGAGTAGATTCTATGAAATTATTAGGCTCCCTCTTCTCAGCTGTCCA
ATTTCCAAAATGGGCTTCTGATGTAAGAATAAATAATAATAATAACAATC
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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