CK932959

Overview
NameCK932959
Unique NameCK932959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK932959 vs. ExPASy Swiss-Prot
Match: RBSK_SCHPO (Putative ribokinase OS=Schizosaccharomyces pombe GN=SPBC16G5.02c PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 2 
Query:  302 LVVVGSANFDIYVEIDRLPKVGETVSAKTS--QTLAGGKGANQAACGAKLSHP----TYFVGQVGEDASGKLITDALSGCGVRLDYVNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGAN 640
            +VV+GS N D+ +     P  GET+  +     T  GGKGANQA   A+LS+P       +G VG+DA G  +   L   GV +D  NV K     TG A+++++  G+N I++  GAN
Sbjct:    4 IVVLGSMNTDLVMRTKICPSGGETIHGEPDGFSTGNGGKGANQAVAVARLSNPADTKVSMLGCVGDDAFGVEMLSGLKKDGVNVD--NVKKIENKSTGVAMIIVEETGENRILLSEGAN 120
The following BLAST results are available for this feature:
BLAST of CK932959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RBSK_SCHPO8.621e-1137.82Putative ribokinase OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932959 ID=CK932959; Name=CK932959; organism=Citrus sinensis; type=EST; length=712bp
GCGGGGAAAACGANNACCTCTCTCCTTGTCTCATNNNAAAGTTTGAAATN
NNNCTGCTCTGCAAAAGCTAATAACAATAATAAAAATAATAATCATGAAA
GGAATATCGCTTTCACCATCAAACAATTGTCAACTCAAATTCCAAAACAT
CCTCGCAAAACAACTCAACAAACCGATCAACACAACCCCATTTCACTTCA
CCACCACAAATCGCCAATTCCCCACACATGTTATTAAATGCCAATGTCAG
CGAAGAGACCAAAACCTAGTACCCAAAAACCCCATTAACACGCCACCACC
ACTGGTAGTAGTTGGCTCAGCCAATTTTGATATCTATGTGGAAATCGACA
GGCTTCCTAAAGTAGGCGAGACAGTTTCAGCCAAGACTAGCCAGACTCTT
GCTGGGGGCAAGGGTGCCAATCAGGCTGCTTGTGGGGCGAAACTCTCCCA
TCCAACTTACTTTGTGGGTCAAGTGGGTGAAGATGCAAGTGGGAAATTGA
TCACTGATGCTTTGAGTGGATGTGGGGTGAGATTGGATTATGTGAATGTT
GTTAAAGATGGTGGTGTCCCTACTGGACACGCTGTGGTGATGCTGCAGTC
TGATGGGCAGAACTCTATTATCATTGTTGGTGGGGCTAATATGAGTTGTT
GGCCTGAGAAGTTTGGTGATGAGGATTTGGAGGTTGTGAAGAAGGCTGGG
ATTGTTTTGCTT
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