CK932964

Overview
NameCK932964
Unique NameCK932964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: CYB5_MORAP (Cytochrome b5 OS=Mortierella alpina PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.770e-16
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 3
Query:  144 EVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIP 389
            +++ H      +L I GKVYD + F+D+HPGG+EVLI   G+DAT  FEDVGHSD AR++M K  +G+    +  + +A  P
Sbjct:   11 DLSQHTTKDSLYLAIHGKVYDCTGFIDEHPGGEEVLIDEAGRDATESFEDVGHSDEARDIMSKLLVGEFKTDSSEKPKAKSP 92          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  HN    CW+I+ G +YD + F+ DHPGG + ++   G D T +FE + HSD A++M++ Y IG++
Sbjct:  534 STPFMNTTAKMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKMLEDYRIGEL 616          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 31/84 (36.90%), Postives = 52/84 (61.90%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            SS  M +  K++   EV  HN  +  W+I+ G +YD + F+ DHPGG + ++   G D T +FE + HSD A+++++ Y IG++
Sbjct:  531 SSPFMNTSAKMYSMSEVRKHNSVESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 613          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            SS  M +  K +   EV  HN     W+I++G VYD + F+ DHPGG++ ++   G D T +FE + HSD A++M++ Y IG++
Sbjct:  507 SSPFMNTATKSYSLSEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTEEFEAI-HSDKAKKMLEDYRIGEL 589          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            SS  M +  K +   EV  HN     W+I+ G VYD + F+ DHPGG + ++   G D T +FE + HSD A++M++ Y IG++
Sbjct:  509 SSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKQMLEDYRIGEL 591          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 3
Query:   42 HXXXESPNSFALLSVSLVCSSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            H      +S  +L  S+  SS  M +  K++   EV  HN     W+I+ G VYD + F+ DHPGG + ++   G D T +FE + HSD A++M++ Y +G++
Sbjct:  496 HLEISQQDSRPILKKSV--SSPFMNTFTKMYSLSEVKKHNSPDSAWIIVHGHVYDCTRFLKDHPGGADSILINAGTDCTEEFEAI-HSDKAKKMLEDYRVGEL 595          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   63 NSFALLSVSLVCSSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            +S A  S+    SS  M +  K+    EV  HN  +  W+I+ G +YD + F+ DHPGG + ++   G D T +F+ + HSD A++M++ Y IG++
Sbjct:  508 SSDANQSLKKSVSSPFMNTSSKMFSMSEVKKHNSAESAWIIVHGHIYDCTHFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 602          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            SS  M +  K +   EV  HN     W+I+ G VYD + F+ DHPGG + ++   G D T +FE + HSD A++M++ Y IG++
Sbjct:  505 SSPFMNTTSKTYTMSEVRRHNNADSAWIIVHGHVYDWTRFLKDHPGGTDRILINAGTDCTEEFEAI-HSDKAKQMLEDYRIGEL 587          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 30/84 (35.71%), Postives = 52/84 (61.90%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  HN  +  W+I+ G +YD + F+ DHPGG + ++   G D T +FE + HSD A+++++ Y IG++
Sbjct:  531 STPFMNTASKMYSMSEVRKHNSAESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 613          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            SS  M +  K++   EV  HN     W+I+ G +YD + F+ DHPGG + ++   G D T +FE + HSD A+++++ Y IG++
Sbjct:  537 SSPFMNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 619          
The following BLAST results are available for this feature:
BLAST of CK932964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
CYB5_MORAP5.770e-1645.12Cytochrome b5 OS=Mortierella alpina PE=1 SV=1[more]
NIA2_ARATH1.571e-1338.10Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA2_BRANA4.572e-1336.90Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA1_PHAVU4.572e-1339.29Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA2_SOYBN7.798e-1339.29Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA_LOTJA1.330e-1234.95Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA_BETVE1.330e-1235.42Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA1_SOYBN1.737e-1239.29Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]
NIA1_BRANA1.737e-1235.71Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA1_ARATH2.269e-1236.90Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932964 ID=CK932964; Name=CK932964; organism=Citrus sinensis; type=EST; length=753bp
GGGGGTTGTTTTAGACTTAGTTTGACTGCTGCAGGCTTTGACATCANNNN
NNAGAGAGCCCAAATTCTTTTGCTCTCCTCTCTGTCTCTCTCGTCTGCAG
TAGCGAACAAATGGCCTCAGATCCAAAGATTCACCAGTTCGAAGAGGTCG
CCACGCACAACAAAACTAAGGATTGCTGGCTTATTATTTCTGGCAAGGTG
TATGATGTGTCCTCGTTCATGGATGATCACCCTGGAGGAGATGAGGTTTT
GATTTCTGCAACTGGGAAAGATGCAACAAATGACTTTGAAGATGTGGGTC
ACAGTGACTCCGCTAGGGAGATGATGGACAAGTACTATATTGGTGACATT
GATCCCTCAACTGTTCCTCGGAAACGTGCATATATTCCACCGCAGCAACC
TGCTTACAATCAAGACAAGACCCCTGAGTTCATTATTAAGATTCTACAGA
TTCTTGTGCCGCTCTTGATATTGGGTTTAGCCTTTGCGGTCAGACACTAT
ACCAAGAAAGAGTAGGTCACAATATCAATAAAATGAGTCATCTCCGGAAT
GGGAAGCTGGTGATTTGCATGAGCTTAGTTCTAGGACATTTATCTTTTAT
TTACTTTCCTATGGTGTTTGGTTTTGCTGAAATTGAATAGTGGTTCGTAG
TCCACCAGAGACCATATTGTCTGTCTTCTCTTGAGTGTCTTGTTTCTAAT
GTTTTTCATTGATGGTCATGGGACAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
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