CK932964

Overview
NameCK932964
Unique NameCK932964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGG-DEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  HN +   W+I+ G +YD S F+ DHPGG D +LI+A G D T +F+ + HSD A+++++ + IG++
Sbjct:  528 STPFMNTASKMYSMSEVRKHNSSDSAWIIVHGHIYDASRFLKDHPGGVDSILINA-GTDCTEEFDAI-HSDKAKKLLEDFRIGEL 610          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 33/102 (32.35%), Postives = 60/102 (58.82%), Query Frame = 3
Query:  126 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPPQQPAYNQDKTPEF 431
            +I + +E+  H   +  W +++ +VYD +SF++ HPGG + +ISA G DA+++F  + HS++A+ MM  Y+IG + P+   +     P  + A +    P F
Sbjct:  537 RIVELDELKWHESAEYPWFVVNDEVYDGTSFLEGHPGGAQSIISAAGLDASDEFMAI-HSETAKAMMPAYHIGTLSPTASKQLSLEEPTSKQASSSSLRPTF 637          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +    +   EV  HN  +  W+I+ G VYD + F+ DHPGG + ++   G D T +F+ + HSD A++M++ Y IG++
Sbjct:  535 STPFMNTASNTYTLSEVKKHNSPQSAWIIVHGHVYDCTRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 617          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGG-DEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  HN     W+I+ G VYD + F+ DHPGG D +LI+A G D T +F+ + HSD A+++++ + IG++
Sbjct:  527 STPFMNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINA-GTDCTEEFDAI-HSDKAKKLLEDFRIGEL 609          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 30/84 (35.71%), Postives = 57/84 (67.86%), Query Frame = 3
Query:  126 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKR 377
            +I   EE   ++  +  W +++G+VYD ++F++ HPGG + +ISA G DA+ +F ++ HS++A++MM  Y+IG +D +++   R
Sbjct:  513 RIIDLEEFKKNSSDERPWFVVNGEVYDGTAFLEGHPGGAQSIISAAGTDASEEFLEI-HSETAKKMMPDYHIGTLDKASLEALR 595          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 28/84 (33.33%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            SS  M +        EV  HN     W+++ G +YD +SF+ DHPGG + ++   G D T +F+ + HSD A++++++Y +G++
Sbjct:  526 SSPFMNTTSLTFTMSEVKKHNSADSAWIVVHGHIYDCTSFLKDHPGGSDSILLNAGTDCTEEFDAI-HSDKAKKLLEEYRVGEL 608          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: FAD5A_DICDI (Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 3
Query:  126 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDV-GHSDSAREMMDKYYIGDIDPSTVPR 371
            K + + E+A HN   DCW+ + GKVYD++ ++  HPGG EVL+ A G+D TN FE     SD    ++  Y IG I     P+
Sbjct:   14 KQYSWSELAKHNTENDCWVAVDGKVYDITRWVPLHPGGKEVLLLAAGRDVTNLFESYHPMSDKPTSILKNYEIGYISSYEHPK 96          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 3
Query:  141 EEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIG 344
            +EVA HN  K CW I    VYD + F+D+HPGG   ++   G D T++FE + HS  A +M+ KY IG
Sbjct:  543 DEVAKHNSKKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFESI-HSTKAWQMLKKYCIG 609          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 27/84 (32.14%), Postives = 52/84 (61.90%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  H+     W+I+ G +YD + F+ DHPGG + ++   G D T +F+ + HSD A+++++++ IG++
Sbjct:  523 STPFMNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKLLEEFRIGEL 605          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 3
Query:  144 EVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            EV  H      W+++ G VYD ++F+ DHPGG + ++   G D T +F+ + HSD A+E++D Y IGD+
Sbjct:  527 EVRKHASQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKELLDTYRIGDL 594          
The following BLAST results are available for this feature:
BLAST of CK932964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
NIA_SOLLC8.622e-1238.82Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA_LEPMC8.622e-1232.35Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA_CUCMA1.471e-1135.71Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA_PETHY1.921e-1138.82Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA_EMENI1.921e-1135.71Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA_CICIN1.921e-1133.33Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
FAD5A_DICDI1.921e-1140.96Delta(5) fatty acid desaturase A OS=Dictyostelium ... [more]
NIA_PHYIN3.276e-1145.59Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
NIA1_TOBAC3.276e-1132.14Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA3_MAIZE4.279e-1140.58Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932964 ID=CK932964; Name=CK932964; organism=Citrus sinensis; type=EST; length=753bp
GGGGGTTGTTTTAGACTTAGTTTGACTGCTGCAGGCTTTGACATCANNNN
NNAGAGAGCCCAAATTCTTTTGCTCTCCTCTCTGTCTCTCTCGTCTGCAG
TAGCGAACAAATGGCCTCAGATCCAAAGATTCACCAGTTCGAAGAGGTCG
CCACGCACAACAAAACTAAGGATTGCTGGCTTATTATTTCTGGCAAGGTG
TATGATGTGTCCTCGTTCATGGATGATCACCCTGGAGGAGATGAGGTTTT
GATTTCTGCAACTGGGAAAGATGCAACAAATGACTTTGAAGATGTGGGTC
ACAGTGACTCCGCTAGGGAGATGATGGACAAGTACTATATTGGTGACATT
GATCCCTCAACTGTTCCTCGGAAACGTGCATATATTCCACCGCAGCAACC
TGCTTACAATCAAGACAAGACCCCTGAGTTCATTATTAAGATTCTACAGA
TTCTTGTGCCGCTCTTGATATTGGGTTTAGCCTTTGCGGTCAGACACTAT
ACCAAGAAAGAGTAGGTCACAATATCAATAAAATGAGTCATCTCCGGAAT
GGGAAGCTGGTGATTTGCATGAGCTTAGTTCTAGGACATTTATCTTTTAT
TTACTTTCCTATGGTGTTTGGTTTTGCTGAAATTGAATAGTGGTTCGTAG
TCCACCAGAGACCATATTGTCTGTCTTCTCTTGAGTGTCTTGTTTCTAAT
GTTTTTCATTGATGGTCATGGGACAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
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