CK932964

Overview
NameCK932964
Unique NameCK932964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8906 contig Csv1_Contig8906:128..880. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K+    EV  H+     W+I+ G VYD + F+ DHPGG + ++   G D T +F+ + HSD A++M++ Y IG++
Sbjct:  505 STPFMNTASKMFSVSEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 587          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 29/71 (40.85%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  126 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY 338
            K++ ++EV+ HN+  D W+I+ GKVY+++ ++  HPGG+++L+ + G+DATN FE      S   M DK+Y
Sbjct:   13 KLYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFE------SYHPMTDKHY 77          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 27/84 (32.14%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  HN     W+++ G VY+ + F+ DHPGG + ++   G D T +F+ + HSD A+ +++ + IG++
Sbjct:  543 STPFMNTTSKMYSMSEVKKHNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKRLLEDFRIGEL 625          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 27/84 (32.14%), Postives = 51/84 (60.71%), Query Frame = 3
Query:   99 SSEQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            S+  M +  K++   EV  H+     W+I+ G +YD + F+ DHPGG + ++   G D T +F+ + HSD A+++++ + IG++
Sbjct:  523 STPFMNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 605          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 3
Query:  117 SDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            +D K     EV  H+     W+++ G VYD ++F+ DHPGG + ++   G D T +F+ + HSD A+ ++D Y IG++
Sbjct:  539 TDGKQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKALLDTYRIGEL 615          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  141 EEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIG 344
            EE+A HNK +DCW+ I G VY+++ +M+ HPGG+E L+ A G+D T+ F+ V    +   M+ +  IG
Sbjct:   60 EELAQHNKKEDCWICIRGMVYNITPYMEYHPGGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIG 127          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 33/101 (32.67%), Postives = 58/101 (57.43%), Query Frame = 3
Query:  141 EEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKR-------AYIPPQQPAYNQDKT 422
            EE+  H+  ++ W +++G+VY+ + F++ HPGG   +  A G+D T++F  + HS++A+ MM  Y+IG + PS     +       A   P +P + Q KT
Sbjct:  623 EELRQHDGEEEPWFVVNGQVYNGTPFLEGHPGGAASITGAAGQDVTDEFLAI-HSENAKAMMPTYHIGTLTPSAPAALKSSSTSDPALSDPSRPIFLQSKT 722          
BLAST of CK932964 vs. ExPASy Swiss-Prot
Match: NIA_CHLVU (Nitrate reductase [NADH] (Fragment) OS=Chlorella vulgaris PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 3
Query:  144 EVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 350
            EV TH   +  W ++ GKVYD + F+ DHPGG + ++   G DAT++F  + HS  A++ + +YYIG++
Sbjct:  223 EVETHTTMESAWFVVDGKVYDATPFLKDHPGGADSILLVAGIDATDEFNAI-HSLKAKKQLLEYYIGEL 290          
The following BLAST results are available for this feature:
BLAST of CK932964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
NIA2_PHAVU4.279e-1135.71Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
FAD5B_DICDI4.279e-1140.85Delta(5) fatty acid desaturase B OS=Dictyostelium ... [more]
NIA_SPIOL5.588e-1132.14Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA2_TOBAC7.299e-1132.14Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA1_ORYSJ7.299e-1135.90Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NB5R4_XENTR7.299e-1142.65Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]
NIA_NEUCR9.533e-1132.67Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
NIA_CHLVU9.533e-1140.58Nitrate reductase [NADH] (Fragment) OS=Chlorella v... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932964 ID=CK932964; Name=CK932964; organism=Citrus sinensis; type=EST; length=753bp
GGGGGTTGTTTTAGACTTAGTTTGACTGCTGCAGGCTTTGACATCANNNN
NNAGAGAGCCCAAATTCTTTTGCTCTCCTCTCTGTCTCTCTCGTCTGCAG
TAGCGAACAAATGGCCTCAGATCCAAAGATTCACCAGTTCGAAGAGGTCG
CCACGCACAACAAAACTAAGGATTGCTGGCTTATTATTTCTGGCAAGGTG
TATGATGTGTCCTCGTTCATGGATGATCACCCTGGAGGAGATGAGGTTTT
GATTTCTGCAACTGGGAAAGATGCAACAAATGACTTTGAAGATGTGGGTC
ACAGTGACTCCGCTAGGGAGATGATGGACAAGTACTATATTGGTGACATT
GATCCCTCAACTGTTCCTCGGAAACGTGCATATATTCCACCGCAGCAACC
TGCTTACAATCAAGACAAGACCCCTGAGTTCATTATTAAGATTCTACAGA
TTCTTGTGCCGCTCTTGATATTGGGTTTAGCCTTTGCGGTCAGACACTAT
ACCAAGAAAGAGTAGGTCACAATATCAATAAAATGAGTCATCTCCGGAAT
GGGAAGCTGGTGATTTGCATGAGCTTAGTTCTAGGACATTTATCTTTTAT
TTACTTTCCTATGGTGTTTGGTTTTGCTGAAATTGAATAGTGGTTCGTAG
TCCACCAGAGACCATATTGTCTGTCTTCTCTTGAGTGTCTTGTTTCTAAT
GTTTTTCATTGATGGTCATGGGACAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
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