CK932992

Overview
NameCK932992
Unique NameCK932992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1512 contig Csv1_Contig1512:1..849. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.670e-15
Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSS--APILLPAIESLYSALVAANLHTQI 849
            +GV  G   +NL S  ++++  +   I  +RLYD +   L+AL  + I +I+ VPN+ L  + ++  TA  W+ +NV+ ++P   I  IAVG+EV     SS  A  +LPA++++Y A+ A  LH QI
Sbjct:    2 IGVCYGMMGNNLPSANEVINLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQI 129          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  439 AKAADPDKEPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPILLPAIESLYSALVAANL 837
            A AA P     +GV  G   +NL S +D+V   + + I  +R+Y AD   L AL  + I +I+ + N+QL  I +S + AASW+  NV  YYP   I  IA G+EV      S   +LPA+ +L +AL AA L
Sbjct:   18 AFAAVPTSVQSIGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGGATQS---ILPAMRNLNAALSAAGL 147          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14
Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVP--SSAPILLPAIESLYSALVAANLHTQI 849
            VGV  G    +L +P+ +V  +Q   I ++R+YD +  +LKA   T I +++ VPN+ L A   S +   +W+  +V+ YYP T IT I VG E  T  P  +++  ++PA++++ +AL    L  +I
Sbjct:   26 VGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAE-STDDPHINASSFVVPAMQNVLTALRKVGLSRRI 152          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13
Identity = 44/130 (33.85%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPE--TLITAIAVGDEVLTTVPSSA--PILLPAIESLYSALVAANLHTQI 849
            +GVN G+   + L P  +V  L+   I  ++L++AD  +LKAL++T I+V+V +PN+ L  +  S   A  W+ +NV A+       I  +AVG+E      +     I LPA++++ SA++ A L TQ+
Sbjct:   27 IGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQV 156          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 41/127 (32.28%), Postives = 72/127 (56.69%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPS-SAPILLPAIESLYSALVAANLHTQI 849
            VG+N G   +NL SP  +   L+   IT ++LYDADP++L + + +++  ++ + N  L  + +  T A  W+ + +  +  +T IT+I VG+E+  T        LLPA++S+Y+AL    L  Q+
Sbjct:   29 VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQV 155          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.567e-13
Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYY---PETLITAIAVGDEVLTTVPSS--APILLPAIESLYSALVAANLHTQI 849
            VG+N GT+ S+ L P+ +V  L+   I  ++L+DADP +L+AL+ + I V + + N+ L ++ +S   A SW+  NV  Y+       I  +AVG+E       +   P ++ A  ++ +ALV ANL  ++
Sbjct:   26 VGINWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEV 156          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYY--PETLITAIAVGDE--VLTTVPSSAPILLPAIESLYSALVAANLHTQI 849
            +G N GT  S+ L P  +V  L+   I  ++L+DA+ D L+AL K+ I V+V +PN  L  + SS   A  W+ KNV  +       I  +AVG+E  + T   S      PA+ ++  A++ A L  Q+
Sbjct:   22 IGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQV 151          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLT-TVPSSAPILLPAIESLYSALVAANLHTQI 849
            +GV  G   +NL S  D+++      I  +R+Y+ D ++  AL  + I +I+ VP   L ++ +  + A  W+  N+I ++P+     IAVG+EV        AP + PA++++Y+AL AA L  QI
Sbjct:   32 IGVCYGKHANNLPSDQDVINLYNANGIRKMRIYNPDTNVFNALRGSNIEIILDVPLQDLQSL-TDPSRANGWVQDNIINHFPDVKFKYIAVGNEVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQI 157          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 1
Query:  463 EPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEV--LTTVPSSAPILLPAIESLYSALVAANLHTQI 849
            E  +GV  G   +NL S ++++   + + I  +RLYD +   L AL  + I VI+ +PN  +  I S    A  W+ KNV  ++P   I  IAVG+E+  +T   + AP  +PA+ ++Y A+  A L   I
Sbjct:   24 EAQIGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDI 154          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 42/130 (32.31%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSS----APILLPAIESLYSALVAANLHTQI 849
            +GV  G   +NL S  D+++  +   I  +R+Y++D ++ K+L  + I +I+ VPN  L A+ +S + A  W+  N+ +++P      I++G+EV    PS+    +  LL A+E++Y+AL AA L  +I
Sbjct:   36 IGVCYGKIANNLPSEQDVINLYKANGIRKMRIYNSDTNIFKSLNGSNIEIILDVPNQDLEALANS-SIANGWVQDNIRSHFPYVKFKYISIGNEV---SPSNNGQYSQFLLHAMENVYNALAAAGLQDKI 161          
The following BLAST results are available for this feature:
BLAST of CK932992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
E13B_PHAVU2.670e-1535.94Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13B_HORVU3.855e-1439.10Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E1313_ARATH5.035e-1433.59Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E135_ARATH3.263e-1333.85Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E1314_ARATH4.262e-1332.28Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E139_ARATH5.567e-1332.82Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E136_ARATH2.763e-1233.85Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13G_TOBAC4.712e-1232.28Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13B_SOLLC6.155e-1233.59Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E13C_TOBAC8.038e-1232.31Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_B05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932992 ID=CK932992; Name=CK932992; organism=Citrus sinensis; type=EST; length=849bp
GCGGGGGAAGTGTTAAACAAACTAATAAAGANNNGGAATTTGCTAGAGCA
TTTTTACCATACTGTCGGCTCAGTCACAAGTCACAAGGTCAATTTGGTGA
TTGCCAGAGATACTGAGCTAGTAAATTGAAAAACACATCTTTTGGGAAGC
AAGAATCGAAGTTAACCCCCAAAATCAAGATATCTTTTGATGAATGTCCT
CTTTCTTCTTCATACTGTACATTTCTCAAGTCAGTAACCAAAAACAAATC
AAAGCCTCTCAAGTAAGACCCACCAAGAACTCCGAAATATTAGAGAAAAT
AATCCCAAAAGATAATGCAAGGTTCTGGAGCTGAACCTCCAGAAGCAGGG
GATAGAGAAGTAAAGCTCCATCTTGGCTTCAATGGAAAACCCTAAGCTGA
CCCTTTTTATCATCTTCTACTTTACGGTACTTAACACAGCTAAAGCAGCT
GACCCAGACAAGGAACCATTTGTTGGTGTGAACATAGGCACCGATGTTTC
AAATTTACTCTCTCCCACGGACTTGGTTTCCTTCTTGCAAGTTCAGAAAA
TCACACACATCAGGCTTTATGATGCAGACCCAGACTTACTCAAAGCACTG
GCTAAAACCAAGATCCGGGTCATTGTCAGTGTGCCCAACAACCAGCTTCT
TGCAATTGGGTCCTCTAACACCACCGCAGCTTCTTGGATTGGTAAAAATG
TTATTGCTTATTACCCTGAAACTCTCATTACTGCCATTGCTGTAGGTGAT
GAGGTCTTAACAACTGTACCCTCTTCAGCTCCAATTTTACTTCCAGCCAT
TGAGTCCCTCTATAGTGCTTTAGTGGCTGCAAATTTGCACACCCAGATC
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