CK932994

Overview
NameCK932994
Unique NameCK932994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.044e-17
Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 2
Query:  137 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYA 565
            +++ KE+  L  DPP      P  ED+   Q +I GP  +PYAGG+F + +    D+P  PPK  F TK+ HP            LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T+ +A
Sbjct:   14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  134 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 529
            SKR+ +EL+ L        +A P  +++F W AT+ GP D+ Y    + +T+ FP DYP+KPP V F T   HP            LKE W+ +  +  +LLS+ SLL +PN   PL  + A M+ S++ +Y
Sbjct:   32 SKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEY 162          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 2
Query:  140 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HP-XXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYGATARSWTQKYAM 568
            R+ KE K++Q++         + +D  +F W A I GP ++PY GGVF +    P  YP +PP+V F TK+ HP             LK  WSPA T+  V  +I +L+  P PD PL  +  ++ +S D   + + A+ +T+  AM
Sbjct:    7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 50/145 (34.48%), Postives = 70/145 (48.28%), Query Frame = 2
Query:  137 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYAMG 571
            +R+ KE+  L  DPP      P  ED+   Q  I GP  +PYA G+F + +    D+P  PPK  F TK+ HP            LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + A+  T+ +A G
Sbjct:   14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTEIHAQG 158          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.780e-17
Identity = 50/143 (34.97%), Postives = 68/143 (47.55%), Query Frame = 2
Query:  143 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYAMG 571
            + KE+  L  DPP      P  ED+     +I GP  +PYAGGVF + +    D+P  PP+  F TK+ HP            LK  W   L +  VLL+I  LL  PNP+  L  E   +   D  +Y + A   T+ +AMG
Sbjct:   16 VYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHAMG 158          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.780e-17
Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 2
Query:  137 KRILKELKDLQK-DPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HP-XXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYGATARSWTQKYAMG 571
            KR+ KE    Q  D        PV + DMFHW+A I GP ++PY GG +++ IH    YP  PP V F+TK+ HP             LK  WSPA ++    L+I SLL++ +   PL  + A + ++ DK  Y +  R  T  YA G
Sbjct:    6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.325e-17
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  131 ASKRIL-KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLK-------------EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATAR 544
            AS+++L K+LK++QK+PP   S G V +  +F W+  I+GP D+ Y GG F  T+ FP DYP  PPK+ F T++ HP            L              E+W P  +   +L+S+ S+L+ PN + P   + A  ++ +  ++    R
Sbjct:    5 ASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVR 157          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.037e-17
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  149 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 529
            K+LKDL K P    SAG V E ++F W  TI+GPPD+ Y GG F   + FP +YP  PP V F + + HP            L              E+W+P  T+  ++LSI S+L+ PN + P   E A  ++  + ++
Sbjct:   11 KQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEF 151          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.966e-17
Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 2
Query:  122 SIMASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYA 565
            S +   R+ +E K  ++D P    A P        D+ +W+  I G P + + GG++ +T+ FP +YP +PPK  F   + HP            L E+  W PA+TI ++LL I  LL DPN   P   E   M+K DK +Y    R+  ++ A
Sbjct:    2 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 156          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.966e-17
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  131 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 529
            AS  + K+LKDL K P    SAG V E ++F W  TI+GPPD+ Y GG F   + FP +YP  PP V F + + HP            L              E+W+P  T+  ++LSI S+L+ PN + P   E A  ++  + ++
Sbjct:    5 ASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEF 151          
The following BLAST results are available for this feature:
BLAST of CK932994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
UBE2S_RANCA1.044e-1734.97Ubiquitin-conjugating enzyme E2 S OS=Rana catesbei... [more]
UBE2C_SPISO1.363e-1736.36Ubiquitin-conjugating enzyme E2 C OS=Spisula solid... [more]
UBC21_ARATH1.363e-1734.01Probable ubiquitin carrier protein E2 21 OS=Arabid... [more]
UB2SC_XENLA1.363e-1734.48Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus lae... [more]
UBE2S_DANRE1.780e-1734.97Ubiquitin-conjugating enzyme E2 S OS=Danio rerio G... [more]
UBC16_SCHPO1.780e-1736.91Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccha... [more]
UBC15_SCHPO2.325e-1732.03Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UBC13_ARATH3.037e-1734.75Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]
UBC9_SCHPO3.966e-1732.26SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyce... [more]
UBC7_ARATH3.966e-1734.69Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_H08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932994 ID=CK932994; Name=CK932994; organism=Citrus sinensis; type=EST; length=748bp
GGGGATCTGCTCCGACGTCGTTCCCCTTTCTCACTGCTATTGCCCTCCGA
TCTCCTTCTTCGCCGCACAAGTGTTGCAGATCCTAGGTTTGTTGTAGCTT
TAACTTTTAATAATCCGTTGAAGCATCATGGCTTCGAAGCGTATTTTGAA
GGAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCCGGTC
CGGTGGCTGAAGACATGTTCCACTGGCAAGCAACAATTATGGGCCCCCCT
GATAGTCCATATGCAGGAGGTGTATTTTTGGTTACCATTCATTTTCCTCC
GGATTATCCCTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTAGC
ACCCAAACATCAACAGCAATGGAAGCATATNNNNTGATATCCTTAAAGAA
CAGTGGAGCCCAGCTCTTACCATTTCAAAGGTCCTGCTTTCTATCTGCTC
GTTGCTTACTGACCCAAATCCTGACGACCCGCTTGTACCGGAGATTGCTC
ACATGTACAAGTCCGACAAGGCCAAATATGGAGCCACTGCCAGGAGCTGG
ACACAGAAGTATGCCATGGGATAGTTGTTTGGATATTGCAGAAATGGAAC
TCATTTATATGAAATATGTTGTGTTTTTTTCTCCTTTTTCTTCAATCTTG
CTTCGGGAAGGGGATGTTTGGTATTTTAGTAATGAGGAAGGATGTTTGGG
GAGGAGTTGCAAGGGCAAGACGTTTTTGTTAATGTTGAATGTTTCTTG
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