CK932994

Overview
NameCK932994
Unique NameCK932994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 2
Query:  137 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 529
            +R++++ K LQ+DPP   S  P  +++  W+A I GP ++P+  G F +++ F  +YP KPP V F +K+ HP            L+ +WSP   ++ +L SI SLL +PNP+ P     A +Y+ ++ +Y
Sbjct:    7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREY 137          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.985e-22
Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 2
Query:  140 RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXX-LKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYA 565
            RI KEL+D +++  +S     P ++++     TI GP  +PY GG F + I  P  YPF+PPK+ F TKV HP             LK+QWSPALT+   L+SI +LL+ P P DP    +A  Y  +   + +TAR WT+ +A
Sbjct:    6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  122 SIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQK 559
            S  A +R++++ K +++D P   SA P+ +++  W A I+GP D+PY  G F + + F  +YP KPP V F +++ HP            L+ +W+P   ++ +L SI SL  DPNP  P   E A +++  K++Y    +   +K
Sbjct:    2 STPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEK 147          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  128 MASKRILKELKDLQKDPPTS---CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HP-XXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYA 565
            +A +RI +E K++ K   TS        V E+    +  I GPPD+PY GG + + I  P  YPF PPKV F TK+ HP             LK+QW+ A+T+  VLLS+ +LL    PDDP    +A+ YK +   +  TAR W   YA
Sbjct:    4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  128 MASKRILKELKDLQKDPPTS---CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HP-XXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYA 565
            +A +RI +E K++ K   TS        V E+    +  I GPPD+PY GG + + I  P  YPF PPKV F TK+ HP             LK+QW+ A+T+  VLLS+ +LL    PDDP    +A+ YK +   +  TAR W   YA
Sbjct:    4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  128 MASKRILKELKDLQKDPPTS---CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HP-XXXXXXXXXXXXLKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKYA 565
            +A +RI +E K++ K   TS        V E+    +  I GPPD+PY GG + + I  P  YPF PPKV F TK+ HP             LK+QW+ A+T+  VLLS+ +LL    PDDP    +A+ YK +   +  TAR W   YA
Sbjct:    4 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.528e-21
Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  131 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXL-------------KEQWSPALTISKVLLSICSLLTDPN 469
            A KR+LKEL+ L KD P    AGP +E+ +F W   I GPPD+PYA GVF   + FP DYP  PPK+ F   + HP            L             +E+WSP  ++ K+LLS+ S+L++PN
Sbjct:    5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPN 131          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 2
Query:  131 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKY 562
            AS+R++KEL++++K    +     V E ++  WQ  I+ P + PY  G F + I+FP +YPFKPPK+ F+TK+ HP            +  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  D+ K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 2
Query:  131 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKY 562
            AS+R++KEL++++K    +     V E ++  WQ  I+ P + PY  G F + I+FP +YPFKPPK+ F+TK+ HP            +  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  D+ K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of CK932994 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 2
Query:  131 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV*HPXXXXXXXXXXXXLK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYGATARSWTQKY 562
            AS+R++KEL++++K    +     V E ++  WQ  I+ P + PY  G F + I+FP +YPFKPPK+ F+TK+ HP            +  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  D+ K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
The following BLAST results are available for this feature:
BLAST of CK932994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
UBC1_CAEEL5.348e-2234.35Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditi... [more]
UBC27_ARATH6.985e-2239.58Ubiquitin carrier protein E2 27 OS=Arabidopsis tha... [more]
UBC2_KLULA1.556e-2132.19Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBE2K_MOUSE2.654e-2138.67Ubiquitin-conjugating enzyme E2 K OS=Mus musculus ... [more]
UBE2K_HUMAN2.654e-2138.67Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens ... [more]
UBE2K_BOVIN2.654e-2138.67Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN... [more]
UBC7_YEAST4.528e-2140.94Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharo... [more]
UB2L3_MOUSE7.723e-2135.62Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus... [more]
UB2L3_HUMAN7.723e-2135.62Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens... [more]
UB2L3_BOVIN7.723e-2135.62Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_H08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932994 ID=CK932994; Name=CK932994; organism=Citrus sinensis; type=EST; length=748bp
GGGGATCTGCTCCGACGTCGTTCCCCTTTCTCACTGCTATTGCCCTCCGA
TCTCCTTCTTCGCCGCACAAGTGTTGCAGATCCTAGGTTTGTTGTAGCTT
TAACTTTTAATAATCCGTTGAAGCATCATGGCTTCGAAGCGTATTTTGAA
GGAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCCGGTC
CGGTGGCTGAAGACATGTTCCACTGGCAAGCAACAATTATGGGCCCCCCT
GATAGTCCATATGCAGGAGGTGTATTTTTGGTTACCATTCATTTTCCTCC
GGATTATCCCTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTAGC
ACCCAAACATCAACAGCAATGGAAGCATATNNNNTGATATCCTTAAAGAA
CAGTGGAGCCCAGCTCTTACCATTTCAAAGGTCCTGCTTTCTATCTGCTC
GTTGCTTACTGACCCAAATCCTGACGACCCGCTTGTACCGGAGATTGCTC
ACATGTACAAGTCCGACAAGGCCAAATATGGAGCCACTGCCAGGAGCTGG
ACACAGAAGTATGCCATGGGATAGTTGTTTGGATATTGCAGAAATGGAAC
TCATTTATATGAAATATGTTGTGTTTTTTTCTCCTTTTTCTTCAATCTTG
CTTCGGGAAGGGGATGTTTGGTATTTTAGTAATGAGGAAGGATGTTTGGG
GAGGAGTTGCAAGGGCAAGACGTTTTTGTTAATGTTGAATGTTTCTTG
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