CK932999

Overview
NameCK932999
Unique NameCK932999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7950 contig Csv1_Contig7950:79..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_XENLA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis GN=ctu1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.184e-70
Identity = 126/177 (71.19%), Postives = 148/177 (83.62%), Query Frame = 2
Query:  269 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            CS+C + +A L+RPKT   +C++CF+  FEEEIH  IV  +LF  GE++ IGASGGKDSTVLA V+  LN R+ YGLDL LLS+DEGISGYRDDSLQTVKRN+ QY LPLKIVSY +LYGWTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L ++KI TGHNADDIAETVL+N L
Sbjct:    5 CSSCEEWRAVLRRPKTGHSLCKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDSTVLAHVMKVLNERYAYGLDLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYGWTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETVLMNFL 181          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_KLULA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyveromyces lactis GN=NCS6 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.184e-70
Identity = 124/179 (69.27%), Postives = 149/179 (83.24%), Query Frame = 2
Query:  263 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            +LC  C+ RKA +KRPK L++IC+ECF+ VFE EIH  IV N LF  GERIA+GASGGKDSTVLA+VL  LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN++QY LPL+IVSYKDLY WTMDEIV   G++N+CT+CGVFRRQALDRGA+ L +  + TGHNADD+AETVL+N L
Sbjct:   18 QLCELCHARKAVMKRPKNLQRICKECFFSVFETEIHNTIVSNNLFHRGERIAVGASGGKDSTVLAYVLKLLNDRHDYGVEIVLLSIDEGIVGYRDDSLATVKRNQVQYDLPLEIVSYKDLYNWTMDEIVACAGIRNSCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDMAETVLMNIL 196          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_MALGO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.546e-70
Identity = 124/179 (69.27%), Postives = 150/179 (83.80%), Query Frame = 2
Query:  263 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            R C  C   +A L+RPKT + +CR CF+ VFE E+HQ IV  QLF+ G+R+AIGASGGKDSTVLA+V+  LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLK++ YK+LYGW+MD+IV  IG KNNCTFCGVFRRQALDRGA+ L VD I TGHNADD+AETVL+N L
Sbjct:    3 RECELCGTERAVLRRPKTGDLVCRACFFHVFETEVHQTIVEAQLFRRGDRVAIGASGGKDSTVLAYVMKTLNERYDYGLNLFLLSIDEGITGYRDDSLETVKRNQEQYGIPLKVLGYKELYGWSMDDIVASIGRKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDMAETVLMNVL 181          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_PICGU (Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia guilliermondii GN=NCS6 PE=3 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.916e-69
Identity = 124/188 (65.96%), Postives = 152/188 (80.85%), Query Frame = 2
Query:  236 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            E K +K    LC  C+Q KA +KRPK L+++C+ECFY VFE EIH  IV  QLFK G+++AIGASGGKDSTVLA VL  LN ++NYGL L LLSIDEGI GYRDDSL TVKRN+IQY +PL+I+SYKDLY W+MDEIV   G++++CT+CGV RRQALDRGA+ L++D + TGHNADD+AETVL+N L
Sbjct:    3 EKKIRKV--TLCDICHQSKAVMKRPKNLQKLCKECFYHVFETEIHNTIVDAQLFKPGDKVAIGASGGKDSTVLASVLKTLNEKYNYGLTLVLLSIDEGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLYNWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAETVLMNLL 188          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_CANGA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida glabrata GN=NCS6 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.495e-69
Identity = 122/179 (68.16%), Postives = 149/179 (83.24%), Query Frame = 2
Query:  263 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            +LC  C+ RKA L+RPK L++IC+ECFY VFE EIH  IV N LF+ GE++AIGASGGKDSTVLA +L  LN RH+YG+ L LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVS++DLY WTMDEIV + G++N+CT+CGVFRRQALDRGA+ L ++ + TGHNADD+AETVL+N L
Sbjct:   20 QLCELCHGRKAVLRRPKNLQKICKECFYYVFETEIHNTIVSNNLFQRGEKVAIGASGGKDSTVLAHILKLLNDRHDYGVKLVLLSIDEGIVGYRDDSLATVKRNQKQYQLPLEIVSFRDLYDWTMDEIVAIAGIRNSCTYCGVFRRQALDRGAAKLDINHVVTGHNADDMAETVLMNIL 198          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_SCHPO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Schizosaccharomyces pombe GN=ncs6 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 8.483e-69
Identity = 123/180 (68.33%), Postives = 148/180 (82.22%), Query Frame = 2
Query:  263 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            +LC  CN+R+ AL RPKT ++IC+ECFY VFE EIH VI+ N+LF  GER+ IGASGGKDSTVLA+V+  LN R++YGL+L+L+S+DEGI GYRDDSL TVKRN+ QYGLP+KIVSY DLY GWTMD +V  IG KNNCT+CGVFRRQALDR A  L +  + TGHNADDIAET+L+N L
Sbjct:    4 KLCQLCNERRPALVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKDSTVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVVARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAETILMNLL 183          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_YARLI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowia lipolytica GN=NCS6 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.089e-67
Identity = 122/178 (68.54%), Postives = 144/178 (80.90%), Query Frame = 2
Query:  266 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            LC  C  RKA LKRPKTL+ IC+ CFY VFE EIH  IV + LF  GER+AIGASGGKDSTVLA V+  LN R+NYG+D  LLSIDEGI GYRDDSL+TVKRN++QY + L++VSY +LYGW+MD+IV  IG KNNCT+CGVFRRQALDRG++ L +  I TGHNADD+AETVL+N L
Sbjct:    2 LCVLCECRKAMLKRPKTLQPICKPCFYNVFETEIHNTIVESNLFFPGERVAIGASGGKDSTVLAHVMKTLNERYNYGVDFVLLSIDEGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELYGWSMDQIVAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAETVLMNLL 179          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_VANPO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.089e-67
Identity = 117/179 (65.36%), Postives = 148/179 (82.68%), Query Frame = 2
Query:  263 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            +LC  C+ RKA ++RPK L++IC+ CF+ VFE EIH+ IV N LF  GER+A+GASGGKDSTVLA+VL  LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+I SY+DLY WTMD+IV+  G++N+CT+CGV RRQALDRGA+ L++  + TGHNADD+AETVL+N L
Sbjct:   19 QLCELCHSRKAIIRRPKNLQKICKLCFFHVFETEIHETIVSNDLFYRGERVAVGASGGKDSTVLAYVLKLLNERHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDLYDWTMDDIVETAGIRNSCTYCGVLRRQALDRGAAKLEIKHVVTGHNADDMAETVLMNIL 197          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_PICST (Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia stipitis GN=NCS6 PE=3 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 6.079e-67
Identity = 119/191 (62.30%), Postives = 153/191 (80.10%), Query Frame = 2
Query:  227 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            E++  K K +   LC  C+ RKA +KRPK L+++C++CFY+VFE EIH  IV  +LF  G+++AIGASGGKDSTVLA VL  LN R++YGL L LLSIDEGI GYRDDSL TVKRN++QY +PL+I+SY+DLY WTMDEIV   G++++CT+CGV RRQALDRGA+ L ++ + TGHNADD+AETVL+N L
Sbjct:    3 EISAKKVKVSA--LCELCHARKAVMKRPKNLQKLCKDCFYKVFETEIHNTIVDAKLFSPGDKVAIGASGGKDSTVLASVLKTLNERYDYGLILVLLSIDEGIKGYRDDSLATVKRNQVQYEMPLEIISYRDLYNWTMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAETVLMNLL 191          
BLAST of CK932999 vs. ExPASy Swiss-Prot
Match: CTU1_DROGR (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila grimshawi GN=GH20281 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.940e-67
Identity = 122/177 (68.93%), Postives = 143/177 (80.79%), Query Frame = 2
Query:  269 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQALDRGASLLKVDKIATGHNADDIAETVLLNXL 799
            C      KAALKRPKT + +C++CF+  FE EIH  IV ++LF+ GE++A+ ASGGKDSTVLA V+  LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCTFCGVFRRQALDRGA LL VD IATGHNADDIAETVL+N L
Sbjct:    5 CKAKCGNKAALKRPKTGDALCKDCFFAAFEAEIHHTIVSSRLFRRGEKVAVAASGGKDSTVLAHVMKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNIL 181          
The following BLAST results are available for this feature:
BLAST of CK932999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CTU1_XENLA1.184e-7071.19Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus... [more]
CTU1_KLULA1.184e-7069.27Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyver... [more]
CTU1_MALGO1.546e-7069.27Cytoplasmic tRNA 2-thiolation protein 1 OS=Malasse... [more]
CTU1_PICGU2.916e-6965.96Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia ... [more]
CTU1_CANGA6.495e-6968.16Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida... [more]
CTU1_SCHPO8.483e-6968.33Cytoplasmic tRNA 2-thiolation protein 1 OS=Schizos... [more]
CTU1_YARLI2.089e-6768.54Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowi... [more]
CTU1_VANPO2.089e-6765.36Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderw... [more]
CTU1_PICST6.079e-6762.30Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia ... [more]
CTU1_DROGR7.940e-6768.93Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_A03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932999 ID=CK932999; Name=CK932999; organism=Citrus sinensis; type=EST; length=801bp
GGGGAATAAAAGAAGTTTAGGGAATGAGAAGGTCCAGAGACTTTGGAGGG
GTGAGGGTGCCGGTCGGACCGCTGCTTTCATAACAGTTCCATTCCGAGAA
GCTGTTGCCGCACTGCAAAAGCAAACTCAAATCTTCAATTTTTCCCTCAT
AACCCAAACTTGATCTCTTGTAAGTCTGTTAGCTTGTCTCTTCATAGTTT
ACTTAGTGGGCCATTAACGGTCAATGGAGGTCGCCGAGTCGAAGTCCAAG
AAGGCCGGTGGCCGCCTTTGTTCCACCTGTAACCAGAGAAAGGCTGCCCT
CAAACGACCTAAAACCCTAGAACAGATATGTAGGGAGTGTTTCTATGAGG
TATTTGAGGAGGAGATCCACCAAGTCATTGTGGGAAATCAGCTATTCAAG
GCTGGTGAGCGTATTGCCATCGGCGCCTCTGGTGGAAAAGATTCCACTGT
CCTTGCTTTTGTGTTGTCAGAGCTGAACCGGCGTCACAACTATGGCCTTG
ATCTTTTCCTCCTATCAATTGATGAAGGCATTTCAGGATACAGGGATGAT
TCACTTCAAACTGTCAAAAGAAATGAAATTCAGTATGGTCTGCCACTGAA
GATTGTTTCATACAAGGATTTATATGGATGGACAATGGATGAGATAGTGA
AGGTGATCGGTTTAAAGAATAATTGCACCTTTTGTGGTGTTTTTCGTCGC
CAGGCCCTTGATCGAGGTGCTTCATTGTTGAAAGTAGACAAGATTGCAAC
GGGACATAATGCAGATGATATTGCAGAAACTGTTCTATTGAACNNNTTGC
G
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