CK933004

Overview
NameCK933004
Unique NameCK933004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.311e-61
Identity = 109/185 (58.92%), Postives = 134/185 (72.43%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            +AFG A++D SG LSPF+FSRR TG++DVR KVL+CGICHTDL+  KNEWG + +P+VPGHEI G VTE                     +C SC+SC +  ENYCPKMILT  + N D T+T GGYSDHMV  E +I+R PD++PLD AAPLLCAG+TVYSP+KY GL + G H+G+VGLGGLG
Sbjct:    8 EAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLG 192          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.982e-61
Identity = 103/185 (55.68%), Postives = 137/185 (74.05%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            KAFGWA++D+SGHLSPF+F+RR+   +DV LK+LYCG+CH+DL  +KN+WGF+ +P+VPGHEIAG VT+                     +C  CE C  DLE+YCPK + TY+S    GT T GGYSD +V ++R++++FPD++PLDA APLLCAGITVYSP+KY+G+ E GKH+G+ GLGGLG
Sbjct:    5 KAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLG 188          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.733e-58
Identity = 100/186 (53.76%), Postives = 131/186 (70.43%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL-PEQGKHVGIVGLGGLG 595
            +AFGWA+ D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT   GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+  E GK +G+ GLGGLG
Sbjct:    6 RAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLG 191          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.700e-57
Identity = 101/187 (54.01%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTI-TFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL-PEQGKHVGIVGLGGLG 595
            KAFGWA+ D SG LSPF+FSRRE G+ DV +K+L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT    GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+  E GK +G+ GLGGLG
Sbjct:    6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLG 192          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.658e-56
Identity = 106/196 (54.08%), Postives = 134/196 (68.37%), Query Frame = 2
Query:   11 ANFXEXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLD-AAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            A+  E EHP KAFGWA+RDSSG LSPFNFSRR+ G+EDV L+VLYCGICHTDL   KN++G S++P VPGHE+ G V E                     +C SC++C ++LENYCPK ILT    + DGT T+GGYSD MV +E ++ R P+ +PLD   +  LC G + +SPLKY+GL + G HVG+VGLGGLG
Sbjct:    3 ASQVEFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLG 197          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 1.404e-55
Identity = 100/189 (52.91%), Postives = 125/189 (66.14%), Query Frame = 2
Query:   29 EHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            EH   A GWA+RD SG LSP+NFSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD +V NE Y++R P  +PLD AAPLLCAG+TVYSP+   GL   GKHVG+VGLGGLG
Sbjct:   78 EHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLG 266          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.395e-55
Identity = 102/192 (53.12%), Postives = 126/192 (65.62%), Query Frame = 2
Query:   29 EHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTD---GTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            EH   A GWA+RD SG LSP+NFSRR   D+DV +KVLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C  CE C N  ENYC KM+ T + ++ D   G  T GG+SD +V NE Y++R P  +PLD+AAPLLCAG+TVYSP+   GL   GKHVG+VGLGGLG
Sbjct:   78 EHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLG 269          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.188e-54
Identity = 102/198 (51.52%), Postives = 132/198 (66.67%), Query Frame = 2
Query:   29 EHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCP-KMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDS--------MPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            +H  KA G A+ D SGHL+P   SRR+TGD+DV +KVLYCGICH+DL  IKNEW  +++P+V GHEI G VTE                      C  CESC +  ENYC   ++ TY+S++ DGT T+GGYSD +V ++R++VRFP S        +PLD+ APLLCAG+TVY+P++  GL E GKHVG+VGLGGLG
Sbjct:   18 QHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLG 215          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.188e-54
Identity = 98/184 (53.26%), Postives = 125/184 (67.93%), Query Frame = 2
Query:   44 AFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            A GWA+RD+SGHLSPF+F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y+VR P S+P D AAPLLCAG+TVYSP+  +GL   GKH+G+VGLGGLG
Sbjct:    8 ALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLGGLG 191          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.552e-54
Identity = 95/172 (55.23%), Postives = 122/172 (70.93%), Query Frame = 2
Query:   80 LSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            LSPF FSRR TGD DVR KVLYCG+CH+DL  +KNEWG + +P+VPGHEI G VTE                     +C SCE+C +D EN C K + TY+  N DG+IT+GGY+D MVA++ +++R+P+++PLD+ APLLCAGIT YSPL+Y GL + G  VG+VGLGGLG
Sbjct:    2 LSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLG 173          
The following BLAST results are available for this feature:
BLAST of CK933004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CADH7_ARATH1.311e-6158.92Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH1_STYHU4.982e-6155.68Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH3_ARATH6.733e-5853.76Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH2_ARATH5.700e-5754.01Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH3_STYHU1.658e-5654.08Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CAD8B_ORYSJ1.404e-5552.91Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ2.395e-5553.13Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CADH7_ORYSJ1.188e-5451.52Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CAD8D_ORYSJ1.188e-5453.26Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
MTDH_PETCR1.552e-5455.23Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933004 ID=CK933004; Name=CK933004; organism=Citrus sinensis; type=EST; length=596bp
GGGGAAAATGGCAAACTTTTANGAANANGAACATCCAGTAAAGGCCTTCG
GGTGGGCATCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCC
AGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGG
GATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTCTC
TCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTT
GGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATG
CATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAA
ATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACGGA
ACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGCTA
CATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCTGC
TTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTACCA
GAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTC
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