CK933004

Overview
NameCK933004
Unique NameCK933004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.703e-54
Identity = 96/184 (52.17%), Postives = 124/184 (67.39%), Query Frame = 2
Query:   44 AFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            A GWA+RD+SGHLSPF+F+RR   ++DV +KVLYCGICHTDL  IKNEWG +++P+VPGHEI G V                       +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y++R P S+P D AAPLLCAG+TVYSP+  +GL   GKH+G+VGLGGLG
Sbjct:    8 ALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLG 191          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.897e-52
Identity = 97/191 (50.79%), Postives = 126/191 (65.97%), Query Frame = 2
Query:   32 HPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPE---QGKHVGIVGLGGLG 595
            H     GWA+ D SG + PF F RRE G +DV +KV YCG+CHTDL  I N+WG +++P+VPGHEI G VT+                     +C  CE C    ENYC K+ LTY+ I  DG+IT+GGYS  +VA++R++VR PD++PLDAAAPLLCAGITVYSP+K  G+ +    G+ +G+VGLGGLG
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLG 197          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.236e-52
Identity = 91/182 (50.00%), Postives = 124/182 (68.13%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            G+A+RDSSGHLSP+ ++ R  G EDV ++V+YCGICH+DL  + NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TVYSP+K+FG+ E GK  GI+GLGG+G
Sbjct:   12 GYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.236e-52
Identity = 91/182 (50.00%), Postives = 124/182 (68.13%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            G+A+RDSSGHLSP+ ++ R  G EDV ++V+YCGICH+DL  + NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TVYSP+K+FG+ E GK  GI+GLGG+G
Sbjct:   12 GYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.606e-51
Identity = 90/182 (49.45%), Postives = 125/182 (68.68%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            G+A+RDSSGHLSP+ ++ R+ G EDV +KV+YCGICH+DL  ++NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TV+SP+K+F + E GK  GI+GLGG+G
Sbjct:   12 GYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.606e-51
Identity = 90/182 (49.45%), Postives = 125/182 (68.68%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            G+A+RDSSGHLSP+ ++ R+ G EDV +KV+YCGICH+DL  ++NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TV+SP+K+F + E GK  GI+GLGG+G
Sbjct:   12 GYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.041e-50
Identity = 89/185 (48.11%), Postives = 124/185 (67.03%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            K  GWA+ DS+GHL+P+ +S R+TG EDV +KV+ CG+CHTD+  IKN+ G S +PMVPGHE+ GEV E                     +C +C  C +++E YC K I +Y+ + TDG  T GG+++ MV +++++VR PD M  + AAPLLCAG+TVYSPLK+FGL + G   GI+GLGG+G
Sbjct:    9 KIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.029e-50
Identity = 90/185 (48.65%), Postives = 124/185 (67.03%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            KA GWA+RD SG LSP++++ R TG +DV +KV+ CGICHTD+  IKN+ G S +PMVPGHE+ GEV E                      C SC+ C+++LE YC K I +Y+ + TDG  T GG++D M+ N++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL   G   GI+GLGG+G
Sbjct:   10 KALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVG 194          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.167e-50
Identity = 93/186 (50.00%), Postives = 121/186 (65.05%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPE-QGKHVGIVGLGGLG 595
            K  GWA+RD SG LSP+ ++ RETG EDV +K++YCGICHTD+  IKN+ G S +PMVPGHE+ GEV E                      C +C  C  D+E YC K I +Y+ + TDG  T GG+S HMV +++++V+ PD M  + AAPLLCAG+TVYSPL +FGL E  G   GI+GLGG+G
Sbjct:    9 KTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVG 194          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.662e-48
Identity = 88/185 (47.57%), Postives = 118/185 (63.78%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            K  GWA+RD++GHLSP++++ R TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL   G   GI+GLGG+G
Sbjct:    9 KVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVG 193          
The following BLAST results are available for this feature:
BLAST of CK933004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CAD8A_ORYSJ7.703e-5452.17Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH6_ORYSJ1.897e-5250.79Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH7_PICAB3.236e-5250.00Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB3.236e-5250.00Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH_PINTA1.606e-5149.45Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA1.606e-5149.45Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH_POPDE1.041e-5048.11Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH4_ARATH3.029e-5048.65Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH1_ARACO5.167e-5050.00Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_MAIZE1.662e-4847.57Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933004 ID=CK933004; Name=CK933004; organism=Citrus sinensis; type=EST; length=596bp
GGGGAAAATGGCAAACTTTTANGAANANGAACATCCAGTAAAGGCCTTCG
GGTGGGCATCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCC
AGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGG
GATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTCTC
TCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTT
GGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATG
CATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAA
ATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACGGA
ACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGCTA
CATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCTGC
TTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTACCA
GAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTC
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