CK933004

Overview
NameCK933004
Unique NameCK933004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.191e-46
Identity = 87/182 (47.80%), Postives = 113/182 (62.09%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            GWA+RD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  ER++V+ PD +  + AAPL+CAG+TVY PL  FGL + G   GI+GLGG+G
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 85/185 (45.95%), Postives = 116/185 (62.70%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            K  GWA+RD++GHL+P+ ++ R TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C+ C  ++E YC K I +Y+ + TDG  T GG++  MV +++++++ P  +  + AAPLLCAG+TVYSPLK FGL   G    I+GLGG+G
Sbjct:    9 KVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.527e-46
Identity = 83/184 (45.11%), Postives = 117/184 (63.59%), Query Frame = 2
Query:   44 AFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            A GWA+RD SG LSP+ ++ R TG EDV++KVLYCG+CH+DL  +KN+ G S +P+VPGHE+ G+V E                     +C +C  C  ++E YC K I   + + TDG  T GG+++ MV ++ ++V+ P+ M  + AAPLLCAGITVYSP  +FG  + G   GI+GLGG+G
Sbjct:   10 AIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVG 193          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.115e-44
Identity = 80/182 (43.96%), Postives = 116/182 (63.74%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            G A++D SG L+P+ ++ R TG +DV +K+ YCG+CH+DL  IKN+ G S +PMVPGHE+ GEV E                      C SC +C +++E YC K I +Y+ + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+TVYSPL +FGL   G   GI+GLGG+G
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVG 194          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.103e-43
Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 2
Query:   50 GWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            GWA+RD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  FGL + G   GI+GLGG+G
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVG 192          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 78/181 (43.09%), Postives = 110/181 (60.77%), Query Frame = 2
Query:   53 WASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            WA+RD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T++ I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+    + + GK +G++GLGGLG
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLG 194          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 77/182 (42.31%), Postives = 107/182 (58.79%), Query Frame = 2
Query:   53 WASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            +A+  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++      + V I+GLGGLG
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTR-VAIIGLGGLG 187          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 77/182 (42.31%), Postives = 107/182 (58.79%), Query Frame = 2
Query:   53 WASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            +A+  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++      + V I+GLGGLG
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTR-VAIIGLGGLG 187          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36
Identity = 74/166 (44.58%), Postives = 101/166 (60.84%), Query Frame = 2
Query:  101 RRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-MILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            RR     DV + + + GICH+D+ +  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K ++ TY+S++ DG  T+GGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +   GK V IVG+GGLG
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNV-GPGKKVAIVGVGGLG 190          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.108e-35
Identity = 75/174 (43.10%), Postives = 101/174 (58.05%), Query Frame = 2
Query:   80 LSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGT-ITFGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            L P + +RRE G  DV++++ YCG+CH+DL  +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  M  TY+S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL+++     GK VG+VG+GGLG
Sbjct:   15 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLG 187          
The following BLAST results are available for this feature:
BLAST of CK933004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CADH1_EUCGU1.191e-4647.80Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_SACOF1.556e-4645.95Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH2_TOBAC4.527e-4645.11Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_MEDSA1.115e-4443.96Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_EUCBO2.103e-4346.15Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH7.479e-4143.09Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU2.252e-3742.31NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.252e-3742.31NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU9.460e-3644.58Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI2.108e-3543.10Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933004 ID=CK933004; Name=CK933004; organism=Citrus sinensis; type=EST; length=596bp
GGGGAAAATGGCAAACTTTTANGAANANGAACATCCAGTAAAGGCCTTCG
GGTGGGCATCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCC
AGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGG
GATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTCTC
TCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTT
GGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATG
CATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAA
ATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACGGA
ACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGCTA
CATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCTGC
TTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTACCA
GAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTC
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