CK933004

Overview
NameCK933004
Unique NameCK933004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:87..682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13
Identity = 52/160 (32.50%), Postives = 68/160 (42.50%), Query Frame = 2
Query:  122 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVG-LGGLG 595
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C  CE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAGITVY  LK   L + G+ V + G  GGLG
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADLS-------GYTHDGSFQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALKTAQL-QAGQWVAVSGAAGGLG 184          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13
Identity = 51/157 (32.48%), Postives = 67/157 (42.68%), Query Frame = 2
Query:  122 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGG 589
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C +CE C +  E  C K  L+       G    G +  +  A+     R P    L  AAP+LCAGITVY  LK   + + G  V I G GG
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLS-------GYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALKTAQI-QPGNWVCISGAGG 181          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13
Identity = 51/164 (31.10%), Postives = 72/164 (43.90%), Query Frame = 2
Query:  107 ETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFP-MVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            + G   V +K    G+CHTDL   K +W     P  +PGHE  G V +                     AC  C  C    E  C     T  S+  DGT     ++ + +A+  ++ R P  +    AAP+LCAG+TVY  LK   +   G+ V + G+GGLG
Sbjct:   24 QPGPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLCGSQQNTGYSV--DGT-----FAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSGIGGLG 179          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13
Identity = 52/160 (32.50%), Postives = 70/160 (43.75%), Query Frame = 2
Query:  122 DVRLKVLYCGICHTDLANIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVG-LGGLG 595
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP+  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK   L + G  V I G  GGLG
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS-------GYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALKSANL-KAGDWVAISGAAGGLG 186          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  143 YCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            YCG+CHTDL ++KN     +  +  GHE  G+V E                     +C  CE C    E  C        S+   G    G  ++ ++    Y V+ P+ +   AA+ + CAG+T Y  +K   + + G+ +G+ G+GGLG
Sbjct:   33 YCGVCHTDL-HVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLC-------RSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLG 174          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  143 YCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            YCG+CHTDL ++KN     +  +  GHE  G+V E                     +C  CE C    E  C        S+   G    G  ++ ++    Y V+ P+ +   AA+ + CAG+T Y  +K   + + G+ +G+ G+GGLG
Sbjct:   33 YCGVCHTDL-HVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLC-------RSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLG 174          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  143 YCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            YCG+CHTDL ++KN     +  +  GHE  G+V E                     +C  CE C    E  C        S+   G    G  ++ ++    Y V+ P+ +   AA+ + CAG+T Y  +K   + + G+ +G+ G+GGLG
Sbjct:   33 YCGVCHTDL-HVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLC-------RSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLG 174          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  143 YCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            YCG+CHTDL ++KN     +  +  GHE  G+V E                     +C  CE C    E  C        S+   G    G  ++ ++    Y V+ P+ +   AA+ + CAG+T Y  +K   + + G+ +G+ G+GGLG
Sbjct:   33 YCGVCHTDL-HVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLC-------RSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLG 174          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH_STAAM (Alcohol dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  143 YCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            YCG+CHTDL ++KN     +  +  GHE  G+V E                     +C  CE C    E  C        S+   G    G  ++ ++    Y V+ P+ +   AA+ + CAG+T Y  +K   + + G+ +G+ G+GGLG
Sbjct:   33 YCGVCHTDL-HVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLC-------RSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLG 174          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: ADH_STAAC (Alcohol dehydrogenase OS=Staphylococcus aureus (strain COL) GN=adh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 43/151 (28.48%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  143 YCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            YCG+CHTDL ++KN     +  +  GHE  G+V E                     +C  CE C    E  C        S+   G    G  ++ ++    Y V+ P+ +   AA+ + CAG+T Y  +K   + + G+ +G+ G+GGLG
Sbjct:   33 YCGVCHTDL-HVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLC-------RSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLG 174          
The following BLAST results are available for this feature:
BLAST of CK933004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
ADH2_PICST5.051e-1332.50Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH1_PICST5.051e-1332.48Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADHA_RHIME6.597e-1331.10Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH1_KLULA6.597e-1332.50Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH_STAAW8.616e-1328.48Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS8.616e-1328.48Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAR8.616e-1328.48Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN8.616e-1328.48Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAM8.616e-1328.48Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAC8.616e-1328.48Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933004 ID=CK933004; Name=CK933004; organism=Citrus sinensis; type=EST; length=596bp
GGGGAAAATGGCAAACTTTTANGAANANGAACATCCAGTAAAGGCCTTCG
GGTGGGCATCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCC
AGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGG
GATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTCTC
TCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTT
GGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATG
CATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAA
ATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACGGA
ACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGCTA
CATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCTGC
TTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTACCA
GAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTC
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