CK933006

Overview
NameCK933006
Unique NameCK933006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB1B_BOVIN (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Bos taurus GN=FKBP1B PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.664e-16
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            MG+    ++PG+G   P  GQ   VH TG  +NG   +KF S++D  + PF F+IGK  VIKG++EG   M +G+ A+L C+PD AYGA G P   I PN+ L F++++L +
Sbjct:    1 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNG---KKFDSSRDRNK-PFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHP-GVIPPNATLIFDVELLNL 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP5_AOTNA (FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.480e-16
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 3
Query:   27 TEKEMGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGA-GGFPQWGIQPNSVLDFEIQVL 365
            ++K+ G+   +   G+G + P+ G KV VH  G   NG   +KF S+ D  + PF F IGKG VIK WD GV  M+ GE+  L C P+YAYGA G  P+  I  N+ L FEI++L
Sbjct:   27 SKKDRGVLKIVKRVGHGEETPMIGDKVYVHYNGKLSNG---KKFDSSHDRNE-PFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPK--IPSNATLFFEIELL 135          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP5_SAGOE (FK506-binding protein 5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.545e-16
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 3
Query:   27 TEKEMGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGA-GGFPQWGIQPNSVLDFEIQVL 365
            ++K+ G+   +   G+G + P+ G KV VH  G   NG   +KF S+ D  + PF F IGKG VIK WD GV  M+ GE+  L C P+YAYGA G  P+  I  N+ L FE+++L
Sbjct:   27 SKKDRGVLKIVKRVGHGEETPMIGDKVYVHYNGKLSNG---KKFDSSHDRNE-PFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPK--IPSNATLFFEVELL 135          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB1B_RAT (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Rattus norvegicus GN=Fkbp1b PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 4.545e-16
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            MG+    ++PG+G   P  GQ   VH TG  +NG   +KF S++D  + PF F+IGK  VIKG++EG   M +G+ A+L C+PD AYGA G P   I PN+ L F++++L +
Sbjct:    1 MGVEIETISPGDGRTFPKKGQICVVHYTGMLQNG---KKFDSSRDRNK-PFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHP-GVIPPNATLIFDVELLNL 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB1B_MOUSE (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Mus musculus GN=Fkbp1b PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 4.545e-16
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            MG+    ++PG+G   P  GQ   VH TG  +NG   +KF S++D  + PF F+IGK  VIKG++EG   M +G+ A+L C+PD AYGA G P   I PN+ L F++++L +
Sbjct:    1 MGVEIETISPGDGRTFPKKGQICVVHYTGMLQNG---KKFDSSRDRNK-PFKFRIGKQEVIKGFEEGTAQMSLGQRAKLTCTPDVAYGATGHP-GVIPPNATLIFDVELLSL 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP_YEAST (FK506-binding protein 1 OS=Saccharomyces cerevisiae GN=FPR1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.936e-16
Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 3
Query:   60 LTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            ++PG+G   P  G  VT+H TG  +NG   QKF S+ D G  PF   IG G VIKGWD G+  + VGE ARL     YAYG  GFP   I PNS L F++++L+V
Sbjct:   14 ISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRGS-PFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGL-IPPNSTLVFDVELLKV 113          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP_YARLI (FK506-binding protein 1 OS=Yarrowia lipolytica GN=FPR1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16
Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            MG+    L PG+G   P  G  VT+H  G  +NG   QKF S++D G+ PF   IG G VI+GWDEGV  + +GE + L  S DY YG  GFP   I PN+ L F++++L +
Sbjct:    1 MGVTVKQLQPGDGKTYPKKGDAVTIHYVGTLENG---QKFDSSRDRGE-PFKTTIGVGDVIRGWDEGVPKLSLGERSVLTISGDYGYGERGFPGL-IPPNATLVFDVELLGI 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_USTMA (FK506-binding protein 4 OS=Ustilago maydis GN=FPR4 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 3
Query:   12 SPIPKTEKEMGIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            S +  T+   G+     + G+GP   AGQKV +   G   NG +  +  S K     PF F++GKG VIKGWDEGV GM+VG   RL C P  AYG    P  GI  NS L F+++++++
Sbjct:  262 SKMTTTKLPSGLVIEEKSAGSGPPCKAGQKVGMRYVGKLTNGKVFDQCTSGK-----PFYFKLGKGEVIKGWDEGVKGMRVGAERRLTCPPKLAYGNQKIP--GIPANSTLVFDVKLVEI 374          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB1B_RABIT (Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Oryctolagus cuniculus GN=FKBP1B PE=3 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            MG+    ++PG+G   P  GQ   VH TG  +NG   +KF S++D  + PF F+IGK  VIKG++EG   M +G+ A+L C+PD AYGA G P   I PN+ L F +++L +
Sbjct:    1 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNG---KKFDSSRDRNK-PFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHP-GVIPPNATLIFGVELLNL 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.322e-15
Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 3
Query:   27 TEKEMGIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGA-GGFPQWGIQPNSVLDFEIQVL 365
            ++K+ G+   +   G+G + P+ G +V VH  G   NG   +KF S+ D  + PF F IGKG VIK WD GV  M+ GE+  L C P+YAYGA G  P+  I  N+ L FE+++L
Sbjct:   27 SKKDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLANG---KKFDSSHDRNE-PFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPK--IPSNATLFFEVELL 135          
The following BLAST results are available for this feature:
BLAST of CK933006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FKB1B_BOVIN2.664e-1643.75Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Bos ... [more]
FKBP5_AOTNA3.480e-1644.35FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP... [more]
FKBP5_SAGOE4.545e-1643.48FK506-binding protein 5 OS=Saguinus oedipus GN=FKB... [more]
FKB1B_RAT4.545e-1643.75Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Ratt... [more]
FKB1B_MOUSE4.545e-1643.75Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Mus ... [more]
FKBP_YEAST5.936e-1648.57FK506-binding protein 1 OS=Saccharomyces cerevisia... [more]
FKBP_YARLI7.752e-1644.64FK506-binding protein 1 OS=Yarrowia lipolytica GN=... [more]
FKBP4_USTMA7.752e-1640.83FK506-binding protein 4 OS=Ustilago maydis GN=FPR4... [more]
FKB1B_RABIT7.752e-1643.75Peptidyl-prolyl cis-trans isomerase FKBP1B OS=Oryc... [more]
FKBP5_SAIBB1.322e-1542.61FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_H02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933006 ID=CK933006; Name=CK933006; organism=Citrus sinensis; type=EST; length=579bp
GGGGACCAGAAAGTCCAATCCCTAAGACAGAGAAGGAGATGGGAATAGNN
NNGNAAATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTGGTCAGAA
GGTTACCGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTGTCTCAGA
AGTTCTGGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATTCCAGATT
GGCAAAGGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGAATGCA
GGTGGGAGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCCTATGGTG
CTGGTGGATTTCCACAATGGGGGATTCAACCTAACTCAGTCCTGGATTTT
GAGATACAAGTCCTGCAGGTAGGATAAGCACCTCATAAAGGCAGAAAACC
ATCTAGAAAATTCTATGGTTTTAAATAAATTGTCTTACCATGGACATGTA
TGTATGTTATCCTGAACTCCTGATAAATATCAGATGGCTATGATGGAACG
ATCTTTTTTTTCGACGTTTTAATAACACTACATGTGCAACTTTTTAGCAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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