CK933006

Overview
NameCK933006
Unique NameCK933006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 4.254e-14
Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   30 EKEMGIXXXILTPGNGPKP-VAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQ 368
            +++ G+   I   G G +  + G +V VH TG+  +G    KF S+ D  +  F+F +GKG VIK WD  V  M+VGEV  + C P+YAYG+ G P   I PN+ L FE+++ +
Sbjct:   28 KQDEGVLKVIKREGTGTETAMIGDRVFVHYTGWLLDGT---KFDSSLDR-KDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPP-KIPPNATLVFEVELFE 136          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP3_YARLI (FK506-binding protein 3 OS=Yarrowia lipolytica GN=FPR3 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14
Identity = 49/125 (39.20%), Postives = 63/125 (50.40%), Query Frame = 3
Query:    6 PESPIPKT---EKEMGIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            P  P PK    + E G+     T G GP    G KV V   G   NG    K + +   G+ PF F +GKG VI+GWD GV GM+V    R+   P  AYG    P  GI PNS L F+++V+ +
Sbjct:  289 PSEPKPKLVTRQLEGGVKIEDRTVGEGPSAKVGSKVGVRYVGKLANG----KVFDSNSKGK-PFYFSVGKGEVIRGWDIGVQGMKVKGERRIIIPPGMAYGKQKLP--GIPPNSQLTFDVKVVNI 406          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB1B_NEUCR (Peptidyl-prolyl cis-trans isomerase fkr-3 OS=Neurospora crassa GN=fkr-3 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDP-GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEI 356
            MG+       G GP+P AGQ V +  TG+ K  D SQ      D  G+  F  QIG G +I+GWDE V+ M+VGE A L  S DY YG  GF    I PN+ L F++
Sbjct:    1 MGVNKITHVAGTGPQPEAGQTVVIEYTGWLK--DSSQADGKGADSIGRGDFVTQIGVGRLIRGWDEAVLKMKVGEKATLDISSDYGYGERGF-HGHIPPNADLIFDV 104          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP3_YEAST (FK506-binding nuclear protein OS=Saccharomyces cerevisiae GN=FPR3 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13
Identity = 50/133 (37.59%), Postives = 66/133 (49.62%), Query Frame = 3
Query:    3 GPESPIPKTEK----------EMGIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            GP  P  K E+          E GI     T G+GP+   G +V +   G  KNG +  K  S K     PF F++G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ +
Sbjct:  284 GPTKPKSKKEQDKHKPKSKVLEGGIVIEDRTIGDGPQAKRGARVGMRYIGKLKNGKVFDKNTSGK-----PFAFKLGRGEVIKGWDIGVAGMSVGGERRIIIPAPYAYGKQALP--GIPANSELTFDVKLVSM 409          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP3_CANGA (FK506-binding protein 3 OS=Candida glabrata GN=FPR3 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 3
Query:   36 EMGIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            E G+     T G+GP    G +V +   G  KNG +  K  S K     PF F++G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ +
Sbjct:  332 EGGVVIEDRTVGDGPAAKKGDRVGMRYIGKLKNGKVFDKNTSGK-----PFVFKLGRGEVIKGWDVGVAGMSVGSERRIIIPAPYAYGKQALP--GIPANSELTFDVKLVSI 436          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_YEAST (FK506-binding protein 4 OS=Saccharomyces cerevisiae GN=FPR4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 3
Query:   15 PIPKTEK-EMGIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            P PKT+  E GI       G GP    G +V +   G  KNG +  K  +TK    +PF F++G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ +
Sbjct:  279 PKPKTKLLEGGIIIEDRVTGKGPHAKKGTRVGMRYVGKLKNGKVFDK--NTKG---KPFVFKLGQGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQALP--GIPANSELTFDVKLVSM 391          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMB (FK506-binding protein OS=Neisseria meningitidis serogroup B GN=fbp PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 3
Query:   42 GIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            G+    L  G G + V G+++TVH TG+ +NG    KF S+ D  +QP T  +G G VIKGWDEG  GM+ G   +L    +  YGA G     I P++ L FE+++L+V
Sbjct:    3 GLIIEDLQEGFGKEAVKGKEITVHYTGWLENGT---KFDSSLDR-RQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHG-AGGVIPPHATLIFEVELLKV 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 3
Query:   42 GIXXXILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 365
            G+   IL  G G + P +G  V++H TG   +G       S  +P    F F +GKG+VIK +D GV  M++GE   L C+P+YAYGA G P   I P++ L FE+++L
Sbjct:   14 GVLKEILKEGTGTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEP----FEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPP-AIPPDATLIFELEML 117          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB1B_ASPFU (FK506-binding protein 1B OS=Aspergillus fumigatus GN=fpr1B PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12
Identity = 48/117 (41.03%), Postives = 64/117 (54.70%), Query Frame = 3
Query:   39 MGIXXXILTPGNGPK-PVAGQKVTVHCTGY-----GKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            MG+    L  GNG   P  G  V ++ TGY       +    ++F S+K  G  P    IG G VI+GWDEGV  M +GE A L  S +YAYG  GFP   I PN+ L FE+++L++
Sbjct:    1 MGLEKQTLRMGNGKDHPQPGDPVELNYTGYLYDESNPDHHKGKEFDSSKRRG--PLKATIGAGDVIRGWDEGVRQMSLGEKAILTMSGEYAYGEKGFPGL-IPPNASLVFEVELLKI 114          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_SPOFR (46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12
Identity = 49/126 (38.89%), Postives = 66/126 (52.38%), Query Frame = 3
Query:    9 ESPIPKTEKEM---GIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWST--KDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            E+P+ K EK+    G+    L  G+GP   AG+ V V+  G  K  +   K +    K PG   F F++G   VI GWD G+ GM+VG   ++ C P  AYGA G P   I PNS L FE+ +  V
Sbjct:  293 EAPVEKKEKKQIAGGVSIEDLKVGSGPVAKAGKVVMVYYEGRLKQNN---KMFDNCVKGPG---FKFRLGSKEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPP-VIPPNSTLVFEVDLKNV 411          
The following BLAST results are available for this feature:
BLAST of CK933006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FKBP4_RAT4.254e-1439.47FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP3_YARLI9.476e-1439.20FK506-binding protein 3 OS=Yarrowia lipolytica GN=... [more]
FKB1B_NEUCR2.111e-1343.93Peptidyl-prolyl cis-trans isomerase fkr-3 OS=Neuro... [more]
FKBP3_YEAST2.757e-1337.59FK506-binding nuclear protein OS=Saccharomyces cer... [more]
FKBP3_CANGA2.757e-1339.29FK506-binding protein 3 OS=Candida glabrata GN=FPR... [more]
FKBP4_YEAST1.048e-1240.00FK506-binding protein 4 OS=Saccharomyces cerevisia... [more]
FKBP_NEIMB1.787e-1240.91FK506-binding protein OS=Neisseria meningitidis se... [more]
FKB59_DROME1.787e-1240.37FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKB1B_ASPFU1.787e-1241.03FK506-binding protein 1B OS=Aspergillus fumigatus ... [more]
FKBP4_SPOFR2.334e-1238.8946 kDa FK506-binding nuclear protein OS=Spodoptera... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_H02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933006 ID=CK933006; Name=CK933006; organism=Citrus sinensis; type=EST; length=579bp
GGGGACCAGAAAGTCCAATCCCTAAGACAGAGAAGGAGATGGGAATAGNN
NNGNAAATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTGGTCAGAA
GGTTACCGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTGTCTCAGA
AGTTCTGGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATTCCAGATT
GGCAAAGGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGAATGCA
GGTGGGAGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCCTATGGTG
CTGGTGGATTTCCACAATGGGGGATTCAACCTAACTCAGTCCTGGATTTT
GAGATACAAGTCCTGCAGGTAGGATAAGCACCTCATAAAGGCAGAAAACC
ATCTAGAAAATTCTATGGTTTTAAATAAATTGTCTTACCATGGACATGTA
TGTATGTTATCCTGAACTCCTGATAAATATCAGATGGCTATGATGGAACG
ATCTTTTTTTTCGACGTTTTAATAACACTACATGTGCAACTTTTTAGCAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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