CK933006

Overview
NameCK933006
Unique NameCK933006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_EMENI (FK506-binding protein 4 OS=Emericella nidulans GN=fpr4 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12
Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 3
Query:   69 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            G GP   +G  V +   G  +NG    K + +   G+ PFTF++GKG VIKGWD GV GM VG   R+      AYG  G P  GI  NS L F++++L++
Sbjct:  384 GKGPAAASGNTVAMRYIGKLENG----KVFDSNKKGK-PFTFKLGKGEVIKGWDIGVAGMAVGGERRITIPSHLAYGKKGVP--GIPGNSKLIFDVKLLEI 477          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMA (FK506-binding protein OS=Neisseria meningitidis serogroup A GN=fbp PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 3
Query:   60 LTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            L  G G + V G+++TVH TG+ +NG    KF S+ D  +QP T  +G G VIKGWDEG  GM+ G   +L    +  YGA G     I P++ L FE+++L+V
Sbjct:    9 LQEGFGKEAVKGKEITVHYTGWLENGT---KFDSSLDR-RQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGARG-AGGVIPPHATLIFEVELLKV 107          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP_DEBHA (FK506-binding protein 1 OS=Debaryomyces hansenii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12
Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 3
Query:   57 ILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            IL  G+G   PKP  G  VT+H TG  +NG   +KF S++D G+ PF   IG G VI GWD G+  + VG  A+L      AYG  GFP   I PN+ L F++++L V
Sbjct:   11 ILQEGDGKTFPKP--GDLVTIHYTGTLENG---KKFDSSRDRGK-PFQCTIGVGQVIVGWDTGIPKLSVGSRAKLSIPGHEAYGDRGFPGL-IPPNATLLFDVELLNV 111          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_GIBZE (FK506-binding protein 4 OS=Gibberella zeae GN=FPR4 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 3
Query:   42 GIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            G+     T GNG    +G  V V   G  +NG    K +     G+ PF+F+ GKG VIKGWD GV+GM +G   RL      AYG+ G P  GI  NS L F++++L++
Sbjct:  392 GVTVDDRTVGNGRTVKSGDTVGVRYIGKLQNG----KQFDANKKGK-PFSFKAGKGQVIKGWDIGVIGMAIGGERRLTIPAHLAYGSRGLP--GIPANSTLIFDVKLLEI 494          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPOR (FK506-binding protein 4 OS=Aspergillus oryzae GN=fpr4 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12
Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 3
Query:   69 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            G GP   AG  V +   G  ++G    K +     G+ PFTF++GKG VIKGWD GV GM VG   R+   P  AYG    P  GI  NS L F++++L++
Sbjct:  376 GKGPAAKAGNTVAMRYIGKLEDG----KVFDANKKGK-PFTFKLGKGEVIKGWDIGVAGMAVGGERRISIPPHLAYGKKALP--GIPGNSKLIFDVKLLEI 469          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPFU (FK506-binding protein 4 OS=Aspergillus fumigatus GN=fpr4 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12
Identity = 41/101 (40.59%), Postives = 56/101 (55.45%), Query Frame = 3
Query:   69 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            G GP   AG  V +   G  ++G    K +     G+ PFTF++GKG VIKGWD G+ GM VG   R+   P  AYG    P  GI  NS L F++++L++
Sbjct:  395 GKGPAAKAGNTVAMRYIGKLEDG----KVFDANKKGK-PFTFKLGKGEVIKGWDIGIAGMAVGGERRITIPPHLAYGKKALP--GIPANSKLIFDVKLLEI 488          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 3
Query:   42 GIXXXILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 365
            G+    L  G+GP P +G+KV V   G   NG        T      PFTF+IG   VI+GWD GV  M+VG   RL    D AYG  G P   I PN+ L F+++++
Sbjct:  260 GLQYEDLVVGSGPSPKSGKKVGVKYIGKLTNGKTFDSSLRT------PFTFRIGIREVIRGWDIGVASMKVGGKRRLTIPADLAYGRSGAPP-SIPPNATLIFDVELV 360          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 3
Query:   81 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            K  +G K+ +H TG   NGD   KF S+ D G  PF F+IG G VIKGWD+GV+GM VGE  +L   P   YG  G     I  NS L F+++++ +
Sbjct:   41 KTKSGDKLKIHYTGTLLNGD---KFDSSVDRGT-PFEFKIGVGQVIKGWDQGVLGMCVGEKRKLIIPPSLGYGQQGAGD-KIPGNSHLIFDVELIGI 132          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 3
Query:    3 GPESPIPKTEKE-----MGIXXXILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 365
            G E P  K  +E      G+   +L  G G   P  G +V VH TG   +G   +KF S++D     F F++G+G VIKGWD+G+  M+ GE A     P+ AYG  G P   I  N+ L F++++L
Sbjct:   24 GAEGPGMKVGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDR-DDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPP-TIPANATLQFDVELL 145          
BLAST of CK933006 vs. ExPASy Swiss-Prot
Match: FKBP3_RABIT (FK506-binding protein 3 OS=Oryctolagus cuniculus GN=FKBP3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 3
Query:  108 VHC--TGYGKNG---DLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 371
            VHC  TG  ++G   D + +  S K    +P +F++G G VI+GWDE ++ M  GE ARL   P++AYG  G P   I PN+ L FE++++ +
Sbjct:  131 VHCWYTGTLQDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLIFEVELVDI 223          
The following BLAST results are available for this feature:
BLAST of CK933006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FKBP4_EMENI2.334e-1241.58FK506-binding protein 4 OS=Emericella nidulans GN=... [more]
FKBP_NEIMA3.048e-1242.31FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP_DEBHA3.981e-1244.44FK506-binding protein 1 OS=Debaryomyces hansenii G... [more]
FKBP4_GIBZE3.981e-1240.00FK506-binding protein 4 OS=Gibberella zeae GN=FPR4... [more]
FKBP4_ASPOR3.981e-1241.58FK506-binding protein 4 OS=Aspergillus oryzae GN=f... [more]
FKBP4_ASPFU3.981e-1240.59FK506-binding protein 4 OS=Aspergillus fumigatus G... [more]
FKBP4_DICDI6.791e-1239.81FK506-binding protein 4 OS=Dictyostelium discoideu... [more]
FKBP2_DICDI6.791e-1244.33FK506-binding protein 2 OS=Dictyostelium discoideu... [more]
FKB70_WHEAT6.791e-1237.0170 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKBP3_RABIT8.869e-1239.78FK506-binding protein 3 OS=Oryctolagus cuniculus G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_H02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933006 ID=CK933006; Name=CK933006; organism=Citrus sinensis; type=EST; length=579bp
GGGGACCAGAAAGTCCAATCCCTAAGACAGAGAAGGAGATGGGAATAGNN
NNGNAAATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTGGTCAGAA
GGTTACCGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTGTCTCAGA
AGTTCTGGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATTCCAGATT
GGCAAAGGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGAATGCA
GGTGGGAGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCCTATGGTG
CTGGTGGATTTCCACAATGGGGGATTCAACCTAACTCAGTCCTGGATTTT
GAGATACAAGTCCTGCAGGTAGGATAAGCACCTCATAAAGGCAGAAAACC
ATCTAGAAAATTCTATGGTTTTAAATAAATTGTCTTACCATGGACATGTA
TGTATGTTATCCTGAACTCCTGATAAATATCAGATGGCTATGATGGAACG
ATCTTTTTTTTCGACGTTTTAATAACACTACATGTGCAACTTTTTAGCAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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