CK933017

Overview
NameCK933017
Unique NameCK933017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933017 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  472 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQE----VKQMVVATLAESGMNLSDDVIETIIDKTFEEAXTKHDGKIDKEE 774
            A R+F + D    G + F+EF  +LSVF  +   ++K++F+F++YD+ + G+I   E    +K MV       G NL +D ++ I+DKT  E     DGKI  EE
Sbjct:   58 ASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMV-------GTNLREDQLQQIVDKTIMEVDKDRDGKISFEE 155          
BLAST of CK933017 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11
Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  472 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEAXTKHDGKIDKEE 774
            A R+ ++FD  ++G + F+EF  +LS+F      D K+ F+F++YD+ + G+I   E   + +      G NL D+ ++ I+D+T  E     DGK+  EE
Sbjct:   58 AKRIIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGE---LFIVLKIMVGTNLEDEQLQQIVDRTIMENDVDGDGKLSFEE 155          
BLAST of CK933017 vs. ExPASy Swiss-Prot
Match: CANB_DEBHA (Calcineurin subunit B OS=Debaryomyces hansenii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  472 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQE---VKQMVVATLAESGMNLSDDVIETIIDKTFEEAXTKHDGKIDKEE 774
            A R+ D+FD   NG + F+EF   LS F       DK++F+F++YD+ + G+I   E   V +M+V      G NL D+ ++ I+DKT  EA    DG+++  E
Sbjct:   58 AARLMDVFDEDGNGTIDFQEFIMGLSAFSGKTSKLDKLKFAFKIYDIDRDGYIGNGELFIVMKMMV------GKNLQDEELQQIVDKTMMEADEDGDGRLNFHE 155          
BLAST of CK933017 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 1
Query:  472 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIETIIDKTFEEAXTKHDGKIDKEE 774
            A R+ ++FD  ++G + F+EF   LSVF   +  ++K+ F+F++YD+ + G+I   E   + +      G NL D+ ++ ++D+T  E     DGK+  EE
Sbjct:   58 AGRIMEVFDADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGE---LFIVLKIMVGNNLEDEQLQQVVDRTIMENDVDGDGKLSFEE 155          
The following BLAST results are available for this feature:
BLAST of CK933017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CANB_SCHPO4.480e-1136.19Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CANB_KLULA4.480e-1132.67Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
CANB_DEBHA5.851e-1136.54Calcineurin subunit B OS=Debaryomyces hansenii GN=... [more]
CANB_ASHGO7.642e-1131.68Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_G07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933017 ID=CK933017; Name=CK933017; organism=Citrus sinensis; type=EST; length=774bp
GGGGAAACTCTGAATCATTCATCCATTGCCTGTCTTCAAAGAACTGCCTT
CATTCACTCTCAAGTCTCAACAGCAACACCACCCTCATCAATTCAAATTT
TGTTCCTGCTTTCCCAAAAGATATTGATTGGCAGGTATAACAACTTTTGC
GAGTTGGACTTGCCGAGTACAAATAGGAAATGGTTAAAAGGTATGGAGTG
TTTTGATGTGCAGAGACTATCATGTTGCAGTGCATAGAGGGATTTAAGCA
TTTATTTGCTTCCCTATTGCAGTGTTGTGATACAAATCCGTCTAGGGGCC
TCGAAGATCCTGAAATACTTGCGAGAGAGACAGTTTTTAGTGTAAGTGAA
ATCGAGGCACTGTATGAGCTCTTTAAGAAGATTAGCAGTGCTGTGATTGA
TGACGGTCTAATTAACAAGGAAGAGTTCCAGTTAGCATTATTCAAGACAA
ACAAAAAAAGAGAGCTTGTTTGCTGATCGGGTTTTTGACCTATTTGATAC
AAAGCACAATGGAATACTAGGGTTTGAAGAGTTTGCTCGTGCTCTTTCTG
TTTTCCATCCAAATGCCCCAATTGATGATAAAATTGAGTTCTCTTTTCAA
CTATATGATCTCAAGCAGCAAGGTTTTATTGAGAGGCAGGAGGTGAAGCA
AATGGTGGTAGCTACACTTGCAGAATCTGGCATGAATCTTTCGGATGATG
TTATAGAAACTATAATTGATAAGACCTTTGAAGAAGCTNNTACAAAACAT
GATGGGAAGATCGACAAGGAAGAG
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