CK933020

Overview
NameCK933020
Unique NameCK933020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_BACC3 (Histidine ammonia-lyase OS=Bacillus cereus (strain 03BB102) GN=hutH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            ++ L G TLT+ ++  +      V    ++ + V      V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPNSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLG 157          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_BACC2 (Histidine ammonia-lyase OS=Bacillus cereus (strain G9842) GN=hutH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            ++ L G TLT+ ++  +      V    ++ + V      V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLG 157          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_BACAH (Histidine ammonia-lyase OS=Bacillus thuringiensis (strain Al Hakam) GN=hutH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            ++ L G TLT+ ++  +      V    ++ + V      V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPNSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLG 157          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_RALSO (Histidine ammonia-lyase OS=Ralstonia solanacearum GN=hutH PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14
Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  331 VVNLGGETLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            ++ L    +T A +  +  + T V LS      + AS+  V   + +G  +YG+ TGFG  A +   T     LQ+ LI         +   +   L  +  R  +L++  +L +GYSG+R  +++ +  +LN  I PC+P +G++ ASGDL PL+++   + G
Sbjct:    6 ILTLHPGEMTFADLRRVWLAPTPVTLSGDCAAAIEASAATVQAIVARGEPAYGINTGFGKLARTQIATHELEHLQRNLI-------LSHAVGTGQDLDDNVARLVLLMKAASLARGYSGVRRVVIDTLLAMLNAGIVPCIPSKGSVGASGDLAPLAHMTLAMLG 162          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_STRAW (Histidine ammonia-lyase OS=Streptomyces avermitilis GN=hutH PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 53/163 (32.52%), Postives = 81/163 (49.69%), Query Frame = 1
Query:  334 VNLGGETLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFGA--TSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            V +G   +T + V A+A     +ELS  A   + A+   V     K    YGV+TGFGA  T H   +    LQ+ ++R   AG+          +     RA M +R+ T+  G++G+R E+ + +  +LN  ITP +   G++  SGDL PLS+ A  L G
Sbjct:    4 VVVGTSGVTASDVLAVARGGARIELSGEAVTALAAARGIVDALAAKPEPVYGVSTGFGALATRHISQELRAQLQRNIVRSHAAGM-------GPRVEREVVRALMFLRLKTVCSGHTGVRPEVAQTMADILNAGITPVVHEYGSLGCSGDLAPLSHCALTLMG 159          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_BURPP (Histidine ammonia-lyase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 46/156 (29.49%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  355 LTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            LT+ Q+  IA     ++L  ++   + A +  V +   KG  +YG+ TGFG  A++H        LQ+ L+     G+          +     R  + +++++L +G+SGIR E++EA+  L N ++ P +P++G++ ASGDL PL++++  L G
Sbjct:    9 LTLPQLRQIAREHVALQLDPASHAAIDACAQAVADIAAKGEPAYGINTGFGRLASTHIPHDQLELLQRNLVLSHAVGV-------GEPMSRPVVRLLIALKLSSLGRGHSGIRREVMEALITLYNADVLPVIPVKGSVGASGDLAPLAHMSATLLG 157          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_GLUDA (Histidine ammonia-lyase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=hutH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  352 TLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            TL++A +  +A S+ +V L+   R+ +  ++  V   +  G   YGV TGFG  +  R  +     LQ+ L+    AGI          +   T R  +L++ N L +G+SG+R EI++ + ++ N  + P +P +G++ ASGDL PL+++   L G
Sbjct:   12 TLSLADLRRLAFSAPSVTLAAGVRDTLAQAARSVDRIVADGRPVYGVNTGFGKLARTRIADANLRDLQRNLVLSHAAGI-------GAPMDDRTVRLILLLKANGLARGHSGVRPEIVDLLLEMGNRGVLPVIPQKGSVGASGDLAPLAHMTAVLIG 161          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_CLOTE (Histidine ammonia-lyase OS=Clostridium tetani GN=hutH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14
Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 1
Query:  334 VNLGGETLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            V L G  LT+ ++  +A     V LSE A++ V  S   + + +      YGVTTGFG   +          LQ+ LIR   +   G G + S  +     RA ML R N L +GYSGIR   L  + ++LN  + P +  +G++ ASGDL PL+++   + G
Sbjct:    7 VILTGNDLTLEELVLVAREGYKVALSEEAKDSVLESRKIIDDIVENEKVVYGVTTGFGEFCNVSISKEDCKTLQENLIR---SHACGYGPKFSTDI----VRAIMLTRANALSKGYSGIRIGTLNTLIEMLNAGVHPQIHEKGSLGASGDLAPLAHMVLPMLG 162          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_AZOSE (Histidine ammonia-lyase OS=Azoarcus sp. (strain EbN1) GN=hutH PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 1
Query:  355 LTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            LT+A++  IA S + +EL  +    V   +  V      G  +YG+ TGFG  A +H        LQK L+     G+          L   T R  + +++ +L +G+SG+R E++ A+  L N  + P +P +G++ ASGDL PL++++  L G
Sbjct:   11 LTLAELRTIAFSDSRLELEPACFPVVARGAATVAAIARSGEPAYGINTGFGRLAQTHIPDDQLELLQKNLVLSHAVGV-------GEPLSAPTVRLVLALKIASLARGHSGVRMELINALLGLFNAGVIPRVPSKGSVGASGDLAPLAHLSALLLG 159          
BLAST of CK933020 vs. ExPASy Swiss-Prot
Match: HUTH_DEIDV (Histidine ammonia-lyase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 1
Query:  352 TLTVAQVAAIATSSTNVELSESAREGV*ASSNWVMESMNKGTDS-YGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAXXLTG 816
            TL+V Q  A+      VELS++AR  +   +  V+E +  G  + YGV TGFG  +  R         +L +  +  I  +       LP    R  +L+R  +L  G+SG R E+++ +  LLN    P +P +G++ ASGDL PL+++A  L G
Sbjct:    6 TLSVEQFIAVVRRHEPVELSDTARSRI-VRARAVIEQIVDGDQAVYGVNTGFGKFASVRVDRA-----QLAQLQHNLIVSHAIGVGEPLPAEVVRGMLLLRAQSLALGHSGARPEVVDLLLALLNAQAHPVIPAQGSVGASGDLAPLAHLALSLIG 155          
The following BLAST results are available for this feature:
BLAST of CK933020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
HUTH_BACC31.634e-1430.49Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACC21.634e-1430.49Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACAH1.634e-1430.49Histidine ammonia-lyase OS=Bacillus thuringiensis ... [more]
HUTH_RALSO2.134e-1428.66Histidine ammonia-lyase OS=Ralstonia solanacearum ... [more]
HUTH_STRAW2.787e-1432.52Histidine ammonia-lyase OS=Streptomyces avermitili... [more]
HUTH_BURPP2.787e-1429.49Histidine ammonia-lyase OS=Burkholderia phytofirma... [more]
HUTH_GLUDA3.639e-1430.57Histidine ammonia-lyase OS=Gluconacetobacter diazo... [more]
HUTH_CLOTE4.753e-1433.74Histidine ammonia-lyase OS=Clostridium tetani GN=h... [more]
HUTH_AZOSE6.208e-1430.77Histidine ammonia-lyase OS=Azoarcus sp. (strain Eb... [more]
HUTH_DEIDV8.108e-1432.69Histidine ammonia-lyase OS=Deinococcus deserti (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933020 ID=CK933020; Name=CK933020; organism=Citrus sinensis; type=EST; length=818bp
GCGGGGAGGAAATCCATTATATTTATAGANNNCAGAATTTCCTTTAGCTC
ATTCATTCTTCATCACTCCCATTCATTCATTCTTCTTCTTCTTCTTCTTT
CTACAGTTTTGGTATTTTTTGTAATTGCAGTAACATTTACGTAAAACGAT
ATGGAGAGAGGTGCCACTACTGAGAATGGTCACCAGAACGGTGGCCTGGA
GGGTTTGTGCAAGAATGACAATTACAATTACAGTTCTGGGGATGCGTTGA
ACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCATTTGGAGGAAGTG
AAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAACCTCGGTGGTGA
GACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGTCCTCTACGAATG
TGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCTAGGCCAGCAGTAATTGG
GTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGGCGTTACCACTGG
CTTTGGCGCCACTTCTCATCGGAGAACCAAGAACGGCGGTGCTCTTCAGA
AGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGAAACGGAACAGAG
TCATCTCACACGCTACCTCACTCAACAACAAGGGCAGCCATGCTTGTGAG
GGTTAACACTCTTCTCCAGGGCTACTCTGGCATCCGATTTGAAATCCTGG
AAGCGATCACAAAGCTGCTCAATCACAACATCACTCCATGCCTCCCTCTT
CGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCTTTCCTACATTGC
CNNNNTGCTCACCGGCCG
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