CK933032

Overview
NameCK933032
Unique NameCK933032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1516 contig Csv1_Contig1516:1..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAST (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae GN=RPS1A PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.013e-63
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.013e-63
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS6 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.013e-63
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS2 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.013e-63
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS1 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1A PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.013e-63
Identity = 120/202 (59.41%), Postives = 151/202 (74.75%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RKI+LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3)

HSP 1 Score: 243.047 bits (619), Expect = 1.324e-63
Identity = 119/202 (58.91%), Postives = 152/202 (75.25%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS7 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.324e-63
Identity = 119/202 (58.91%), Postives = 152/202 (75.25%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS6 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.324e-63
Identity = 119/202 (58.91%), Postives = 152/202 (75.25%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS2 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.324e-63
Identity = 119/202 (58.91%), Postives = 152/202 (75.25%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
[Close]
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS1 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1B PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.324e-63
Identity = 119/202 (58.91%), Postives = 152/202 (75.25%), Query Frame = 2 
Query:  158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 763
            +W+DIKAPS F  RNVGKTLV ++ G K AS+ LK RV EV L DL   E+H++RK++LR ++VQGKN+LTNF GM+FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKR  YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQN+ +RKVK+LK PKFD+G LM
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALM 229
The following BLAST results are available for this feature:
BLAST of CK933032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
RS3A1_YEAST1.013e-6359.4140S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS71.013e-6359.4140S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS61.013e-6359.4140S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS21.013e-6359.4140S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A1_YEAS11.013e-6359.4140S ribosomal protein S1-A OS=Saccharomyces cerevi... [more]
RS3A2_YEAST1.324e-6358.9140S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]
RS3A2_YEAS71.324e-6358.9140S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]
RS3A2_YEAS61.324e-6358.9140S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]
RS3A2_YEAS21.324e-6358.9140S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]
RS3A2_YEAS11.324e-6358.9140S ribosomal protein S1-B OS=Saccharomyces cerevi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_D12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933032 ID=CK933032; Name=CK933032; organism=Citrus sinensis; type=EST; length=770bp
GGGGCTCTTCACTCACAATGAACGAGCTAGGACTAGGTAGCAGCGGAGCC
GTCTCTTGAGCAGCAGCTGCACAAACATGGCTGTCGGGAAGAACAAGAGG
ATTTCAAAGGGGAAGAAAGGAGGCAAGAAGAAGGCTGCTGATCCGTTTGC
CAAGAAGGACTGGTATGATATCAAGGCTCCATCTTGTTTCCGCGTCAGAA
ATGTTGGCAAGACTCTTGTTACCCGGACTCAGGGTACCAAGATTGCATCA
GAAGGTCTCAAGCACAGAGTGTTTGAGGTATCACTAGGTGATCTTCTCAA
TGAAGAAGAGCATGCTTACAGGAAGATCAGACTGAGAGCTGAAGATGTCC
AAGGGAAGAATGTTTTGACTAACTTCTGGGGCATGAATTTCACTACAGAC
AAGCTGAGGTCTTTGGTTAGGAAGTGGCATACCTTGATTGAAGCTTACGT
GGATGTCAAGACCACTGATAACTTCACATTGAGGTTGTTCTGCATTGGAT
TCACCAAGAGACTTCCAAACCAGGTTAAGAGGACTTGCTACGCACAGACC
AGCCAGATTAGACAGATTCGCCGCAAGATGAGGGAGATCATGGTTGCTCA
GGCAGCATCTTGTGATCTTAAGAGCTTGGTCGAAAAGTTCATTGCTGAAG
TGATTGGAAGAGAGATTGAGAAGGCAACGTCAAGCATATACCCCTTACAA
AATGTGTTCATTCGCAAAGTGAAGATCCTGAAAGCTCCCAAGTTTGATCT
TGGAAAATTGATGGAGGTTC
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