CK933032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_THEON (30S ribosomal protein S3Ae OS=Thermococcus onnurineus (strain NA1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16 Identity = 57/195 (29.23%), Postives = 91/195 (46.67%), Query Frame = 2 Query: 158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 +WY + AP F + +G T E + RV E +L DL + K+ + DV+G+N T F G + +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R IR MR+I+ +A + K + + + + EI K IYP++ IRK+K+L P+ Sbjct: 21 EWYVVYAPDFFGNKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTKGQVKLYFQIYDVKGQNAYTKFKGHTLSRSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYRR---------IQTSQERAIREIMRDIIYKKAEELNYKDFILEAVTGKMATEIAKEARKIYPIKRAEIRKIKVLAEPE 199
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_THESM (30S ribosomal protein S3Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 2 Query: 158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 DWY + AP F +G T E +K R+ E +L D+ + + K+ R DV+G+N T F G +RSLVR+ T I+ +V T D + LR+ + R Q+SQ R +R M +++ +A V + + +G E+ + IYPL+ IRK+K+L P+ Sbjct: 21 DWYIVYAPEFFGNVEIGLTPADEP-------EKVKGRIIETTLRDVTGDFTKGHVKLYFRIHDVKGQNAYTKFKGHKLARSYIRSLVRRRTTRIDGIFNVTTKDGYKLRVMGMVIAIR---------RIQSSQERAVREVMEDLIRKKAEELTFTEFVLEAVNGKMGAELAREAKKIYPLKRAEIRKIKVLAEPE 199
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_THEGJ (30S ribosomal protein S3Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 56/195 (28.72%), Postives = 91/195 (46.67%), Query Frame = 2 Query: 158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 +W+ + AP F + +G T E + RV E +L DL + + K+ + DV+G+N T F G +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R IRR +++I+ +A + V + + I EI K IYP++ IRK+K+L P+ Sbjct: 21 EWFVVYAPDFFGSKEIGLTPADEP-------EKVIGRVVETTLKDLTGDFTKGHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYR---------RIQTSQERAIRRIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEIRKIKVLAEPE 199
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_ENTBH (40S ribosomal protein S1 OS=Enterocytozoon bieneusi (strain H348) GN=RPS1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 57/187 (30.48%), Postives = 97/187 (51.87%), Query Frame = 2 Query: 188 FRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRL-PNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILK 733 F + N G T + + + + L R F V+ GDL + ++ R + + V G N + F GM + +K+ ++RKWHTLIEA + + T D T R+F TK+ P+ +K YA+ S+I+ IR+++ E + +++ LV+ E + +E E + IYP+ + I KVK +K Sbjct: 41 FPITNHGTTSHPKMRSKQDLTPFLVGRTFSVNQGDLECADPMNAVNSPRYFKFKVNAVCGNNCNSVFNGMEVSREKITGMIRKWHTLIEANIPITTKDGSTWRVFVNAVTKKKNPDSLKH--YAKASEIKIIRKRIVETTLEHLDGIEVEKLVKVLSTEGLAKEFETRCNEIYPIFAMII-KVKPIK 224
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_PYRKO (30S ribosomal protein S3Ae OS=Pyrococcus kodakaraensis GN=rps3ae PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 55/194 (28.35%), Postives = 90/194 (46.39%), Query Frame = 2 Query: 158 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 +WY + AP F + +G T E + RV E +L DL + + K+ + DV+G+N T F G +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R IR+ +++I+ +A + V + + I EI K IYP++ +RK+K+L P Sbjct: 21 EWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTKGHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYR---------RIQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEVRKIKVLAEP 198
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_PYRIL (30S ribosomal protein S3Ae OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 53/193 (27.46%), Postives = 96/193 (49.74%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 W+ + APS +G + ++ + L R EVSL D+ + H K+R + V G +T F G+ T D +RSLVRK + + A V+VKT D + +R+ + T T ++Q +R++M +++ +A+ D+ +++ + ++ ++ A I PL+ V I K+K+LK P Sbjct: 27 WFSVYAPSY-----LGGVFLAEVPASE--PQKLLLRTLEVSLFDITKDLSHLPIKLRFQIHKVDGLKAITRFKGLELTRDYIRSLVRKGTSKVSAIVEVKTKDGWVMRIAVLAIT---------THRIGSAQKSAMRKRMFDVLTRKASEMDIGQFLKEVLEGLLTADLFVAGKKIAPLRKVEIAKIKVLKYP 203
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_PYRCJ (30S ribosomal protein S3Ae OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 49/164 (29.88%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 248 SEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 ++ L R EV+L D+ + H K+R + V G N T F G+ T D LRSL+R+ + I A DVKT D + +R+ +G T T T+Q IR++ E++ +AA D+ +++ + + ++ A I P++ V + K+K+L+ P Sbjct: 49 AQKLVKRTLEVTLYDITKDISHLPIKLRFQIHRVDGLNASTRFKGLELTRDYLRSLIRRGTSKIMAITDVKTKDGWVMRVAVLGVT---------THRVGTAQKSAIRKRFIEVVTKKAAEADIGQFLKEVLEGTLAADLFIAGKKIAPMRKVEVAKIKVLRYP 203
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_THENV (30S ribosomal protein S3Ae OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.661e-15 Identity = 55/193 (28.50%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 WY + APS +G + + ++ L R EVSL D+ + H K+R + V G T F G+ T D +RSLVRK + + A VDVKT D + +R+ + T T+Q IR+++ E + +A+ D+ +++ + + E+ A I PL+ V + K+K+L+ P Sbjct: 27 WYTVYAPSY-----LGGVALAEVPAAE--AQKLLLRTIEVSLYDITKDISHLPIKLRFQIHRVDGLKAATRFKGLELTRDYVRSLVRKGTSKVSAIVDVKTKDGWVMRISILAVTAH---------RIGTAQKSAIRKRVAEALSRKASDSDVGQFLKEVLEGSLAAELFVAGKKIAPLRKVEVAKIKVLRYP 203
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULTO (30S ribosomal protein S3Ae OS=Sulfolobus tokodaii GN=rps3Ae PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14 Identity = 58/193 (30.05%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 W+ I AP F G+ ++ T A++ L +V E +L DL + Y + R V+G +LT F G + D +RSLVR+ + I+A DV T D + LR+ + T T A SQ +IR+ + I+ +A+ V+ + + +I + IYPL+ V + K K+LKAP Sbjct: 16 WFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVYVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALT---------TYRAHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRKVEVEKTKLLKAP 192
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULIY (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +AT IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201 The following BLAST results are available for this feature:
BLAST of CK933032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933032 ID=CK933032; Name=CK933032; organism=Citrus sinensis; type=EST; length=770bpback to top |