CK933032
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULIN (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +AT IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULIM (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +AT IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULIL (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +AT IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULIK (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +AT IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULIA (30S ribosomal protein S3Ae OS=Sulfolobus islandicus (strain M.16.27) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTL---VTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 766 WY I AP F ++G T VT+T G ++ E +L DL + Y + + +G ++T F G + D LRSL+R+ + + + DV T D G+ R+ V T SQ IR+ + E + +A+ ++ + + EI +AT IYPL+ I K K+LK P+ +LGK +E Sbjct: 17 WYSIIAPKVFGEVSLGSTPAYDVTQTIGRRV----------ETTLYDLTGDFSQVYVHLYFKIVSNEGDRLITRFVGHELSRDYLRSLIRRKSSKVNSVFDVTTKD---------GYVVRVKGLVLTTYKCHQSQKTAIRKIINETISKKASELTFDDFTQEVVFGRLANEIFEATKKIYPLRKAEIEKTKVLKVPE-NLGKQVE 201
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METTH (30S ribosomal protein S3Ae OS=Methanobacterium thermoautotrophicum GN=rps3Ae PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.531e-14 Identity = 56/193 (29.02%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 WY IK+P F +G T ++ LK RV E ++ +L + Y K++ + + V G T F G TTD +RS++R+ + ++A V V+T D + L++ + T R A++SQ + +R+ + E + A+ + LVE + I EI IYPL+ V I K ++L+ P Sbjct: 18 WYVIKSPKLFGENEIGTT------PSRDPDFLLKRRV-EATMRELTGDFSKQYVKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLAITIRR---------AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQAKKIYPLKRVEIIKSRVLEEP 194
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_METB6 (30S ribosomal protein S3Ae OS=Methanoregula boonei (strain 6A8) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14 Identity = 57/190 (30.00%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 173 KAPSCFRVR---NVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLF--CIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKI 727 KA S F+V N+GK + T +++ E +K R+ + +LG++ N+ + K+ + +V G T F G T D LRSLV++ + I+ +V V T DN +RL C F + A +Q +R + +VAQA + DL +LV ++ I +++ K ++YP + V I K K+ Sbjct: 15 KAKSWFKVYTPDNLGKAYIGDTIASEV--ETVKGRIMQATLGEITNDYAKQHIKMSFKIAEVTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRLTISCYTFAR-----------ANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_SULAC (30S ribosomal protein S3Ae OS=Sulfolobus acidocaldarius GN=rps3ae PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14 Identity = 65/198 (32.83%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEE----HAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 WY I AP F G+ L+ T I ++ L ++ EV+L DL + H Y KI ++ G + T F+G + D +RSLVR+ + I A VDV T D + LR+ + T T A SQ IR+ + +I +A D V+ I + +I + IYPL+ V I K K+LKAPK Sbjct: 18 WYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVYIHLYFKI---LGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLT---------TYRAHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKTKLLKAPK 196
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_HALMA (30S ribosomal protein S3Ae OS=Haloarcula marismortui GN=rps3Ae PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14 Identity = 53/194 (27.32%), Postives = 88/194 (45.36%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 742 WY ++AP F +GKT + + R E +LG+L N+ K+ + +V + T F T D LRSLVR+ + +EAY+ V TTD++ +++ + T T A SQ + IRR M +++ A + L++ + + I IYPL+ V I+K + P+ Sbjct: 15 WYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT---------TKKADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARPE 192
BLAST of CK933032 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAR (30S ribosomal protein S3Ae OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13 Identity = 51/193 (26.42%), Postives = 91/193 (47.15%), Query Frame = 2 Query: 161 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 739 W+ + AP +G + T+ +E L R EVSL D+ + H K++ + V+G LT F G+ + D ++SLVRK + + A +VKT D +R+ + T T+Q +R+K+ E ++ +A+ D +++ + + ++ A I PL+ V K+K+LK P Sbjct: 27 WFAVHAPPY-----LGGVFLAEVPATE--AEKLLMRTLEVSLYDITKDISHLPVKLKFQIHRVEGLRALTRFKGLELSRDYVKSLVRKGTSKVVAITEVKTKDGMDMRVSVMVITAH---------RLGTAQKSAVRKKITETLLKKASEMDTSQFLKEVLEGTLAADLFIAAKKIAPLRKVEFAKIKVLKYP 203 The following BLAST results are available for this feature:
BLAST of CK933032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933032 ID=CK933032; Name=CK933032; organism=Citrus sinensis; type=EST; length=770bpback to top |